CuGenDBv2

Gene ID	PI0005047
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S8, chloroplastic
Genome location	tig00003741:55769..56173
RNA-Seq Expression	PI0005047
Synteny	PI0005047
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_004841819.1 ribosomal protein S8 [Cucumis melo subsp. melo]

3.2e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009004078.1 ribosomal protein S8 [Cucumis hystrix]

7.1e-68

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009326025.1 ribosomal protein S8 [Citrullus lanatus]

9.2e-68

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009525221.1 ribosomal protein S8 [Hodgsonia macrocarpa]

7.1e-68

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009751857.1 ribosomal protein S8 [Indofevillea khasiana]

9.2e-68

97.76

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENI+KILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU50 30S ribosomal protein S8, chloroplastic

1.5e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A249RXN0 30S ribosomal protein S8, chloroplastic

1.5e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A249RZ88 30S ribosomal protein S8, chloroplastic

1.5e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A286NFR6 30S ribosomal protein S8, chloroplastic

1.5e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A2Z2CM14 30S ribosomal protein S8, chloroplastic

1.5e-68

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

SwissProt top hits

e value

%identity

Alignment

A0ZZ70 30S ribosomal protein S8, chloroplastic

3.5e-62

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG ++I STNITENIV+ILLREGFI+NVRKHRE NK F VLTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q2L942 30S ribosomal protein S8, chloroplastic

1.3e-61

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKHRE NK F VLTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARL+GIGGEILC IW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q2MI65 30S ribosomal protein S8, chloroplastic

3.0e-61

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MG+DTIA IITSIRNADM+RK +VRI STNITENIV+ILLREGFIENVRKHRE+NK F VLTLRHRRNRK PY+ ILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q49KW3 30S ribosomal protein S8, chloroplastic

4.2e-63

88.81

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MG+DTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKH+E+NK F VLTLRHRRNRKGPY+TILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q4VZK0 30S ribosomal protein S8, chloroplastic

9.3e-71

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Arabidopsis top hits

e value

%identity

Alignment

ATCG00770.1 ribosomal protein S8

8.9e-61

87.31

Show/hide

Query:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG VRI STNITE+IVKILLREGFIENVRKHRE+N+ F +LTLRHRRN+K  YKTILNLKRISRPGLRIYSN Q+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGIGIVILSTS+GIMTDREARL+ IGGEILCYIW
Subjt:  GGIGIVILSTSRGIMTDREARLQGIGGEILCYIW

Sequences

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CDS sequence

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ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAA
AATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATA
AAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAAAAAATTCCTAGAATTTTAGGCGGAATCGGCATTGTAATTCTTTCTACT
TCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

mRNA sequence

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Protein sequence

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MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGIGIVILST
SRGIMTDREARLQGIGGEILCYIW

PI0005047 (gene) of Melon (PI 482460) v1 genome