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PI0005058 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005058
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:12705307..12706141
RNA-Seq ExpressionPI0005058
SyntenyPI0005058
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]4.4e-1578.57Show/hide
Query:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIK
        NNQNNPA QN QEQ P YLAHDLD+ I+SYASPNLYDFNPGIAY  FG+N  FEIK
Subjt:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIK

KAA0054793.1 uncharacterized protein E6C27_scaffold437G00780 [Cucumis melo var. makuwa]5.1e-1952.27Show/hide
Query:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQE----CLEAPITRLNLRWTLWPAIVRNGEMMVSARGKRTK
        NNQNNPA+QNA+EQ  TYLAHDLD+ IRSYASPNLYDFN GI  P            VW E    CLEA ITRL +RWTL PAIVR+GEM V A  K+  
Subjt:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQE----CLEAPITRLNLRWTLWPAIVRNGEMMVSARGKRTK

Query:  E-RKESQTNNILDTVRVQRHEKRLNRSSNEKE
        + RKE +    L+ +       RL +  + +E
Subjt:  E-RKESQTNNILDTVRVQRHEKRLNRSSNEKE

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]3.5e-2050Show/hide
Query:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---
        MSEGEQ +F +D EIE+ F+ NRR R+R  +TN  N+QNNQ  PANQ  Q    TYLAH+ DR IRS  SPNLY FNPGI YP FG+N RF+IK V    
Subjt:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---

Query:  -------QECLEAPITRLNLRWTLWPAIVRNG
               + CL  P+  L++   L    +R G
Subjt:  -------QECLEAPITRLNLRWTLWPAIVRNG

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.8e-1672.06Show/hide
Query:  MNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQECLE
        MNNQNNQ  PANQ AQ   PTYLA D DR IRSYASPNLYDFNPGIAYP F +N RFEIKLV  + ++
Subjt:  MNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQECLE

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]3.5e-2050Show/hide
Query:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---
        MSEGEQ +F +D EIE+ F+ NRR R+R  +TN  N+QNNQ  PANQ  Q    TYLAH+ DR IRS  SPNLY FNPGI YP FG+N RF+IK V    
Subjt:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---

Query:  -------QECLEAPITRLNLRWTLWPAIVRNG
               + CL  P+  L++   L    +R G
Subjt:  -------QECLEAPITRLNLRWTLWPAIVRNG

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein2.1e-1578.57Show/hide
Query:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIK
        NNQNNPA QN QEQ P YLAHDLD+ I+SYASPNLYDFNPGIAY  FG+N  FEIK
Subjt:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIK

A0A5A7UFP5 Uncharacterized protein2.4e-1952.27Show/hide
Query:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQE----CLEAPITRLNLRWTLWPAIVRNGEMMVSARGKRTK
        NNQNNPA+QNA+EQ  TYLAHDLD+ IRSYASPNLYDFN GI  P            VW E    CLEA ITRL +RWTL PAIVR+GEM V A  K+  
Subjt:  NNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQE----CLEAPITRLNLRWTLWPAIVRNGEMMVSARGKRTK

Query:  E-RKESQTNNILDTVRVQRHEKRLNRSSNEKE
        + RKE +    L+ +       RL +  + +E
Subjt:  E-RKESQTNNILDTVRVQRHEKRLNRSSNEKE

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.61.7e-2050Show/hide
Query:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---
        MSEGEQ +F +D EIE+ F+ NRR R+R  +TN  N+QNNQ  PANQ  Q    TYLAH+ DR IRS  SPNLY FNPGI YP FG+N RF+IK V    
Subjt:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---

Query:  -------QECLEAPITRLNLRWTLWPAIVRNG
               + CL  P+  L++   L    +R G
Subjt:  -------QECLEAPITRLNLRWTLWPAIVRNG

A0A5A7V2U7 Putative disease resistance RPP13-like protein 18.7e-1772.06Show/hide
Query:  MNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQECLE
        MNNQNNQ  PANQ AQ   PTYLA D DR IRSYASPNLYDFNPGIAYP F +N RFEIKLV  + ++
Subjt:  MNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQECLE

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.61.7e-2050Show/hide
Query:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---
        MSEGEQ +F +D EIE+ F+ NRR R+R  +TN  N+QNNQ  PANQ  Q    TYLAH+ DR IRS  SPNLY FNPGI YP FG+N RF+IK V    
Subjt:  MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVW---

Query:  -------QECLEAPITRLNLRWTLWPAIVRNG
               + CL  P+  L++   L    +R G
Subjt:  -------QECLEAPITRLNLRWTLWPAIVRNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAGGTGAACAACAAGAATTCAGACTTGACTCTGAGATAGAGCAAACTTTTCGGACGAATAGAAGAGCAAGGCGGAGGTTAAACAAAACCAACAATATGAATAA
CCAAAATAACCAAAACAACCCTGCCAACCAGAATGCCCAAGAACAAAAGCCTACTTACTTAGCCCACGATTTGGACAGACATATACGGTCATACGCCTCACCAAACCTAT
ATGATTTTAACCCTGGTATCGCTTACCCATTGTTTGGCAAGAATGCTAGGTTTGAAATCAAGCTTGTTTGGCAAGAATGCTTAGAAGCTCCTATAACCAGATTAAATCTA
CGTTGGACACTATGGCCAGCAATAGTCAGGAATGGTGAGATGATGGTTTCGGCTCGCGGTAAGAGAACAAAGGAAAGAAAGGAATCACAGACTAATAATATTCTAGACAC
CGTTAGAGTCCAACGCCATGAAAAACGCTTAAATCGGAGTTCTAACGAAAAAGAAAGAGCAAAAAGAATCCAGGGGCATTTTCGAAAATTAGGAAAGATTTCGACCACTC
AGAACGTACTATGTGTCTCCACCCAATGTGCGCCACGAGTCCAGCTCAAGGTCGTGAGTATGAATCTCAGACGCAATACTCTTTTTTCTTCGATTGTGGAAGACTGTCTC
CTCCTCGCGCATGCCCAACTCGTTCGCCACGACCCAATCTGTTCGATCAGCTTCGTGCCCTCTTTTTCTTTCCACTCCGCCACACGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAGGTGAACAACAAGAATTCAGACTTGACTCTGAGATAGAGCAAACTTTTCGGACGAATAGAAGAGCAAGGCGGAGGTTAAACAAAACCAACAATATGAATAA
CCAAAATAACCAAAACAACCCTGCCAACCAGAATGCCCAAGAACAAAAGCCTACTTACTTAGCCCACGATTTGGACAGACATATACGGTCATACGCCTCACCAAACCTAT
ATGATTTTAACCCTGGTATCGCTTACCCATTGTTTGGCAAGAATGCTAGGTTTGAAATCAAGCTTGTTTGGCAAGAATGCTTAGAAGCTCCTATAACCAGATTAAATCTA
CGTTGGACACTATGGCCAGCAATAGTCAGGAATGGTGAGATGATGGTTTCGGCTCGCGGTAAGAGAACAAAGGAAAGAAAGGAATCACAGACTAATAATATTCTAGACAC
CGTTAGAGTCCAACGCCATGAAAAACGCTTAAATCGGAGTTCTAACGAAAAAGAAAGAGCAAAAAGAATCCAGGGGCATTTTCGAAAATTAGGAAAGATTTCGACCACTC
AGAACGTACTATGTGTCTCCACCCAATGTGCGCCACGAGTCCAGCTCAAGGTCGTGAGTATGAATCTCAGACGCAATACTCTTTTTTCTTCGATTGTGGAAGACTGTCTC
CTCCTCGCGCATGCCCAACTCGTTCGCCACGACCCAATCTGTTCGATCAGCTTCGTGCCCTCTTTTTCTTTCCACTCCGCCACACGTTAG
Protein sequenceShow/hide protein sequence
MSEGEQQEFRLDSEIEQTFRTNRRARRRLNKTNNMNNQNNQNNPANQNAQEQKPTYLAHDLDRHIRSYASPNLYDFNPGIAYPLFGKNARFEIKLVWQECLEAPITRLNL
RWTLWPAIVRNGEMMVSARGKRTKERKESQTNNILDTVRVQRHEKRLNRSSNEKERAKRIQGHFRKLGKISTTQNVLCVSTQCAPRVQLKVVSMNLRRNTLFSSIVEDCL
LLAHAQLVRHDPICSISFVPSFSFHSATR