; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005095 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005095
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-binding protein
Genome locationchr04:1313127..1318095
RNA-Seq ExpressionPI0005095
SyntenyPI0005095
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]9.5e-5498.44Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022925642.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata]1.6e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022926831.1 DNA-binding protein DDB_G0278111-like [Cucurbita moschata]2.1e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_023518943.1 DNA-binding protein DDB_G0278111-like [Cucurbita pepo subsp. pepo]2.8e-5396.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRS+LEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]5.5e-5498.44Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A1S3AZB0 DNA-binding protein DDB_G02781114.6e-5498.44Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EC84 DNA-binding protein DDB_G0278111-like isoform X27.8e-5497.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EFZ2 DNA-binding protein DDB_G0278111-like1.0e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X27.8e-5497.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like1.0e-5397.66Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O14737 Programmed cell death protein 54.8e-1643.75Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 54.8e-1643.75Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q2HJH9 Programmed cell death protein 51.8e-1542.97Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M + ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781111.8e-1852.63Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   +PE Q+ QE  + EA ERRQ +L QIL+  ARERLSRI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 54.8e-1643.75Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein2.0e-4683.21Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+AK EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        LITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein2.7e-4682.58Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
        M DPELEAIRQRRMQELMA++GM    G+Q NPEQ+K QE+AK EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
Subjt:  MDDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEE

Query:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        RLITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein5.5e-4480.95Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+AK EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSV
        LITLLEQIN+QTTKQTKVT+    +V
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCCAGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGA
AGCTAAGAGTGAAGCAGAGGAACGTAGGCAAATGATGCTGAGTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCAC
GAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTAGAAAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACAAATCAACAATCAGACCACA
AAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTTCTAGAGGATGACGATTAG
mRNA sequenceShow/hide mRNA sequence
TCGTAATTATGTATTCATTCCAACTTTATTTTGCCCCCACTAGCAAGTCGGAACAATAGTTAGAAAGGCGCCACAGCCTGACCTGAGAGAGTTACGATACGAGCGACAGG
GAAAAAGTGGGTCGCGTCCTATCAACGCAACCGAGCAATTCTTCCCCGTCTCTTCGTTTTTTCCTCCCCAGCTTATAGCGAAATAATTCAACTCTACTTCTACTAACTGC
TACCTCCATCCTCCAAACAATGGATGATCCAGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAAC
AACAGAAGGCCCAGGAAGAAGCTAAGAGTGAAGCAGAGGAACGTAGGCAAATGATGCTGAGTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTG
GTTAAACCTGAGAAGGCACGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTAGAAAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACA
AATCAACAATCAGACCACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTTCTAGAGGATGACGATTAGCAAGTGAGATGAATTGCATACCTTAAATGATATA
ATGCATGTACCAGCAGTCTTGGTTGTATGTTTATTGCTCGCGTGATACAGTATCTACCTTCTTATCTATTACTCTGCTGCGTTATTTTATGGGGATATTCTCACGTCAGA
ATGCGAGAGCTCCTCGGAGTTGGCTGTTATTTCTCCATTGTTGCGGTTATATTTGCCAAACTATTAAGTATCAACCTTGAAATATTATTTTGCTTTCTAATTTGTGATTG
TTAAAGTGGAATTGATTTTCCTTCAATTCTGAGTGAGTTTTAATTTAGAGATTGATCTGTCGCTCTTTGATGCAATCCACACAAATTTGAAACCTTTGAATTCAGCTCTA
GATAAAGGGTTTTCTTGGATTGCTGTTTATAAGTTGAATGATGAAAGTGTATTTAGTATTAGCTTTTGTTTTATTTTCAAAAGTTATTTCGAGAGATCGGTAAACATTCT
ACTCTTTTTCAATATACCTTGTTTTTTAAATTTA
Protein sequenceShow/hide protein sequence
MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
KQTKVTIQRRRSVLEDDD