; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005117 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005117
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVQ domain-containing protein
Genome locationchr03:9970353..9970865
RNA-Seq ExpressionPI0005117
SyntenyPI0005117
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058915.1 protein MKS1-like [Cucumis melo var. makuwa]1.4e-6882.68Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGI
        MPEKKELQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPT+FKDLVQRLTGH   PSSSSN AL   HP PD ISIPIT+ I
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGI

Query:  DDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
        DDQAG VDRII HGILSPTPGLLPPISP IF+ PPP    A  GDLTSLTQFFHDLSPI ANHFS SLDFFQQNFPDFH
Subjt:  DDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

KGN47695.2 hypothetical protein Csa_019084 [Cucumis sativus]9.3e-4970.06Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG
        MPEKKELQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPTEFKDLVQRLTGH   PSSSSN AL   HHP PD ISIP T+ 
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG

Query:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
         IDDQAG VDRII HGILSPTPG                                PIAANHFSSSLDFFQQNFPDFH
Subjt:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

XP_004148825.1 protein MKS1 [Cucumis sativus]5.3e-6883.98Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG
        MPEKKELQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPTEFKDLVQRLTGH   PSSSSN AL   HHP PD ISIP T+ 
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG

Query:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAP----AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
         IDDQAG VDRII HGILSPTPGLLPPIS  IF PPP AP    AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
Subjt:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAP----AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

XP_008441652.2 PREDICTED: protein MKS1-like [Cucumis melo]6.4e-6680.79Show/hide
Query:  EKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGIDD
        +K++LQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPT+FKDLVQRLTGH   PSSSSN AL   HP PD ISIPIT+ IDD
Subjt:  EKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGIDD

Query:  QAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
        QAG VDRII HGILSPTPGLLPPISP IF+ PPP    A  GDLTSLTQFFHDLSPI ANHFS SLDFFQQNFPDFH
Subjt:  QAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

XP_038885910.1 protein MKS1-like [Benincasa hispida]6.4e-5874.71Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG
        MPE+KE+ LQGPRP+ALKITKDSHKIKKPPLPP HP PP RPVIIYTVSPKIIHT+PTEFKDLVQRLTG +P SSSNDAL HP+       TN ID    
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG

Query:  RVDRIIGHGILSPTPGLLPPISPNIFTPPP----PAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
        RV    GHGILSPTPGLLPPIS NIFTPPP     A A D +  TQFF D SPIA NHFSSSLDFFQQNFPDFH
Subjt:  RVDRIIGHGILSPTPGLLPPISPNIFTPPP----PAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein2.5e-6883.98Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG
        MPEKKELQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPTEFKDLVQRLTGH   PSSSSN AL   HHP PD ISIP T+ 
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL---HHPSPD-ISIPITNG

Query:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAP----AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
         IDDQAG VDRII HGILSPTPGLLPPIS  IF PPP AP    AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
Subjt:  -IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAP----AGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

A0A1S3B4N1 protein MKS1-like3.1e-6680.79Show/hide
Query:  EKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGIDD
        +K++LQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPT+FKDLVQRLTGH   PSSSSN AL   HP PD ISIPIT+ IDD
Subjt:  EKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGIDD

Query:  QAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
        QAG VDRII HGILSPTPGLLPPISP IF+ PPP    A  GDLTSLTQFFHDLSPI ANHFS SLDFFQQNFPDFH
Subjt:  QAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

A0A5A7UZA1 Protein MKS1-like6.7e-6982.68Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGI
        MPEKKELQLQGPRPSALKITKDSHKIKKPPLPP     P RPVIIYTVSPKIIHTDPT+FKDLVQRLTGH   PSSSSN AL   HP PD ISIPIT+ I
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQ--PSSSSNDAL--HHPSPD-ISIPITNGI

Query:  DDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
        DDQAG VDRII HGILSPTPGLLPPISP IF+ PPP    A  GDLTSLTQFFHDLSPI ANHFS SLDFFQQNFPDFH
Subjt:  DDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPP----APAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

A0A6J1FKV1 protein MKS1-like3.0e-4565.29Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG
        M E+KELQLQGPRP+ALKITKDSHKI K         PP RPVIIYTVSPK+IHTDPT+FKDLVQRLTGH+PSS  +   HHP     I  TN    +  
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG

Query:  RVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
             +GHGILSPTPGLLPPI  NIFTP PP  A +L+ LT FF DLSPIA N FS SLDFF QNFPD H
Subjt:  RVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

A0A6J1JW33 protein MKS1-like2.6e-4464.12Show/hide
Query:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG
        M E+KE+QLQGPRP+ALKITKDSHKI K         PP RPVIIY+VSPK+IHTDPT+FKDLVQRLTGH+PSS  +   HHP     I  TN    +  
Subjt:  MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAG

Query:  RVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH
             +GHGILSPTPGLLPPI  NIFTP PP  A +L+ LT FF DLSPIA N FS SLDFF QNFPD H
Subjt:  RVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B1.6e-1137.09Show/hide
Query:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNG
        GP+P+ LK+  DSHK IKKPPL P HP                PP  PV IYTV+P+IIHT P  F  LVQRLTG   +S+++ +        S   T+ 
Subjt:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNG

Query:  IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFH
          D +  VD    HG++SP          NI         G+ T + Q++H
Subjt:  IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFH

Q8LGD5 Protein MKS14.1e-1537.97Show/hide
Query:  EKKELQLQGPRPSALKITKDSHKIKKPPL----PPSHPLP----PQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG-----HQPSSSSNDALHHPSPDISI
        +K++LQ+ GPRPS L + KDSHKIKKPP     PP+   P    P+ PV+IY VSPK++H   +EF ++VQRLTG        S    D     SP   +
Subjt:  EKKELQLQGPRPSALKITKDSHKIKKPPL----PPSHPLP----PQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG-----HQPSSSSNDALHHPSPDISI

Query:  PITNGIDDQAGRV----DRII---------------GHGILSPTPGLLPPISPNIFTP
          T     + G+     D  +                 GILSP+P LLP  S  IF+P
Subjt:  PITNGIDDQAGRV----DRII---------------GHGILSPTPGLLPPISPNIFTP

Q9CA36 VQ motif-containing protein 8, chloroplastic1.4e-0753.12Show/hide
Query:  QLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQR--PVIIYTVSPKIIHTDPTEFKDLVQRLTG
        ++ G RPS+LK+  +SH IKK     S P P  R  PVIIY  SPK+IHT   +F  LVQRLTG
Subjt:  QLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQR--PVIIYTVSPKIIHTDPTEFKDLVQRLTG

Q9LS54 VQ motif-containing protein 203.0e-1058.33Show/hide
Query:  PRPSALKITKDSHKIKKPPLPP--SHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG
        P P  LK+ KDSH IKKPP P   S    P+ PVIIYT +P+IIHT+P +F  LVQ+LTG
Subjt:  PRPSALKITKDSHKIKKPPLPP--SHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.1e-1237.09Show/hide
Query:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNG
        GP+P+ LK+  DSHK IKKPPL P HP                PP  PV IYTV+P+IIHT P  F  LVQRLTG   +S+++ +        S   T+ 
Subjt:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNG

Query:  IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFH
          D +  VD    HG++SP          NI         G+ T + Q++H
Subjt:  IDDQAGRVDRIIGHGILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFH

AT1G21326.1 VQ motif-containing protein6.1e-1432.02Show/hide
Query:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDA---------------
        GPRP  LK+  DSHK IKKPPL P HP                PP  PVIIYTVSP+IIHT P  F  LVQRLTG   +S+++ +               
Subjt:  GPRPSALKITKDSHK-IKKPPLPPSHP---------------LPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDA---------------

Query:  -----LHHPSPDISIPITNGIDDQAGR-----------------------------VDRIIGH--GILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQF
             L  P+   ++     I ++ G                               +R   H  GILSP P  LP +SP+ F+   P    D    + F
Subjt:  -----LHHPSPDISIPITNGIDDQAGR-----------------------------VDRIIGH--GILSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQF

Query:  FHDLSPIAANHFS-----SSLDFFQQNF
        F+D + I  +  S     SS+D F   F
Subjt:  FHDLSPIAANHFS-----SSLDFFQQNF

AT1G68450.1 VQ motif-containing protein1.0e-0853.12Show/hide
Query:  QLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQR--PVIIYTVSPKIIHTDPTEFKDLVQRLTG
        ++ G RPS+LK+  +SH IKK     S P P  R  PVIIY  SPK+IHT   +F  LVQRLTG
Subjt:  QLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQR--PVIIYTVSPKIIHTDPTEFKDLVQRLTG

AT3G18360.1 VQ motif-containing protein2.2e-1158.33Show/hide
Query:  PRPSALKITKDSHKIKKPPLPP--SHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG
        P P  LK+ KDSH IKKPP P   S    P+ PVIIYT +P+IIHT+P +F  LVQ+LTG
Subjt:  PRPSALKITKDSHKIKKPPLPP--SHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG

AT3G18690.1 MAP kinase substrate 12.9e-1637.97Show/hide
Query:  EKKELQLQGPRPSALKITKDSHKIKKPPL----PPSHPLP----PQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG-----HQPSSSSNDALHHPSPDISI
        +K++LQ+ GPRPS L + KDSHKIKKPP     PP+   P    P+ PV+IY VSPK++H   +EF ++VQRLTG        S    D     SP   +
Subjt:  EKKELQLQGPRPSALKITKDSHKIKKPPL----PPSHPLP----PQRPVIIYTVSPKIIHTDPTEFKDLVQRLTG-----HQPSSSSNDALHHPSPDISI

Query:  PITNGIDDQAGRV----DRII---------------GHGILSPTPGLLPPISPNIFTP
          T     + G+     D  +                 GILSP+P LLP  S  IF+P
Subjt:  PITNGIDDQAGRV----DRII---------------GHGILSPTPGLLPPISPNIFTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAAAAAAAAGAGCTTCAACTGCAAGGCCCCCGCCCCTCCGCCCTCAAAATCACCAAAGATTCTCACAAGATCAAAAAGCCGCCACTCCCCCCATCGCACCCGCT
GCCGCCACAACGCCCCGTCATCATCTACACAGTCTCCCCTAAGATCATCCACACCGATCCTACCGAGTTCAAGGATTTGGTCCAACGTCTCACGGGCCATCAACCCTCCT
CCTCATCAAACGATGCCCTTCACCACCCAAGTCCAGATATTTCCATACCCATTACAAATGGTATAGATGATCAAGCTGGCCGTGTGGACAGGATTATTGGTCATGGGATA
TTATCGCCCACCCCAGGGTTGCTACCGCCGATTTCTCCCAATATTTTCACTCCCCCACCACCTGCCCCCGCCGGGGATCTCACCTCTCTTACACAATTTTTCCATGACCT
TAGCCCTATAGCTGCCAATCATTTTTCTTCCTCTTTAGATTTCTTCCAACAAAACTTCCCTGATTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAAAAAAAAGAGCTTCAACTGCAAGGCCCCCGCCCCTCCGCCCTCAAAATCACCAAAGATTCTCACAAGATCAAAAAGCCGCCACTCCCCCCATCGCACCCGCT
GCCGCCACAACGCCCCGTCATCATCTACACAGTCTCCCCTAAGATCATCCACACCGATCCTACCGAGTTCAAGGATTTGGTCCAACGTCTCACGGGCCATCAACCCTCCT
CCTCATCAAACGATGCCCTTCACCACCCAAGTCCAGATATTTCCATACCCATTACAAATGGTATAGATGATCAAGCTGGCCGTGTGGACAGGATTATTGGTCATGGGATA
TTATCGCCCACCCCAGGGTTGCTACCGCCGATTTCTCCCAATATTTTCACTCCCCCACCACCTGCCCCCGCCGGGGATCTCACCTCTCTTACACAATTTTTCCATGACCT
TAGCCCTATAGCTGCCAATCATTTTTCTTCCTCTTTAGATTTCTTCCAACAAAACTTCCCTGATTTTCATTAA
Protein sequenceShow/hide protein sequence
MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPSHPLPPQRPVIIYTVSPKIIHTDPTEFKDLVQRLTGHQPSSSSNDALHHPSPDISIPITNGIDDQAGRVDRIIGHGI
LSPTPGLLPPISPNIFTPPPPAPAGDLTSLTQFFHDLSPIAANHFSSSLDFFQQNFPDFH