; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005119 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005119
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:22407026..22407616
RNA-Seq ExpressionPI0005119
SyntenyPI0005119
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060843.1 uncharacterized protein E6C27_scaffold137G00750 [Cucumis melo var. makuwa]1.5e-2458.97Show/hide
Query:  MRNESALRERNLCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTF
        MRNESALR RNLCSMT LRD ATGGRCK   EMGS TA+DIEEDDMDINLEDFD PNP                             K   Y GDLMDTF
Subjt:  MRNESALRERNLCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTF

Query:  CVGMRETSKEIGKIATW
        C  M +TSKEIGKI  W
Subjt:  CVGMRETSKEIGKIATW

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-2157.55Show/hide
Query:  RATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQKE
        +ATGGRCK   E+GSQTA+D EEDDMDINLEDFD PNP                            +K   YSGDLMDTF   MRETSKEIGKIA WQ+E
Subjt:  RATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQKE

Query:  KMEIES
        KMEIES
Subjt:  KMEIES

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]8.0e-2360.19Show/hide
Query:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ
        RDRATGGRCK   EM SQTA+D EEDDMDINLEDFD PNP                            +K   YSGDLMDTF   MRETSKEIGKIATWQ
Subjt:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ

Query:  KEKMEIES
        +EKMEIES
Subjt:  KEKMEIES

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2056.48Show/hide
Query:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ
        RDRATGGRCK   EMG Q A+D EEDDMDINLEDFD PNP                            +K   YS DLMDTFC  MRETSKEI KI  WQ
Subjt:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ

Query:  KEKMEIES
        +EKMEIES
Subjt:  KEKMEIES

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]1.4e-1956.48Show/hide
Query:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ
        RDRATGGRCK   EMG Q A+D EEDDMDINLEDFD PNP                            +K   YS DLMDTF   MRETSKEI KIA WQ
Subjt:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ

Query:  KEKMEIES
        +EKMEIES
Subjt:  KEKMEIES

TrEMBL top hitse value%identityAlignment
A0A0A0L1J1 Uncharacterized protein2.7e-2454.92Show/hide
Query:  LCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPN----------------------------PQKVVIYSGDLMDTFCVGMRETSKEI
        +CSMTRLRDRATGGRCK L EM SQTAKDIEEDDMDINL +FD PN                             +K+  YS DLMDTF   MRETSK+I
Subjt:  LCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPN----------------------------PQKVVIYSGDLMDTFCVGMRETSKEI

Query:  GKIATWQKEKMEIESYTNNYMM
        GKI  WQK K+EIESY +  ++
Subjt:  GKIATWQKEKMEIESYTNNYMM

A0A5A7UY02 Uncharacterized protein7.0e-2558.97Show/hide
Query:  MRNESALRERNLCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTF
        MRNESALR RNLCSMT LRD ATGGRCK   EMGS TA+DIEEDDMDINLEDFD PNP                             K   Y GDLMDTF
Subjt:  MRNESALRERNLCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTF

Query:  CVGMRETSKEIGKIATW
        C  M +TSKEIGKI  W
Subjt:  CVGMRETSKEIGKIATW

A0A5A7VG45 Retrotransposon protein3.6e-2157.55Show/hide
Query:  RATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQKE
        +ATGGRCK   E+GSQTA+D EEDDMDINLEDFD PNP                            +K   YSGDLMDTF   MRETSKEIGKIA WQ+E
Subjt:  RATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQKE

Query:  KMEIES
        KMEIES
Subjt:  KMEIES

A0A5D3C7T4 Uncharacterized protein3.9e-2360.19Show/hide
Query:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ
        RDRATGGRCK   EM SQTA+D EEDDMDINLEDFD PNP                            +K   YSGDLMDTF   MRETSKEIGKIATWQ
Subjt:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ

Query:  KEKMEIES
        +EKMEIES
Subjt:  KEKMEIES

A0A5D3CKC1 Retrotransposon protein6.2e-2156.48Show/hide
Query:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ
        RDRATGGRCK   EMG Q A+D EEDDMDINLEDFD PNP                            +K   YS DLMDTFC  MRETSKEI KI  WQ
Subjt:  RDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNP----------------------------QKVVIYSGDLMDTFCVGMRETSKEIGKIATWQ

Query:  KEKMEIES
        +EKMEIES
Subjt:  KEKMEIES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAATGAAAGTGCATTGAGGGAGAGAAATTTGTGTTCGATGACTAGGTTAAGAGATAGGGCTACTGGCGGTAGATGTAAGATACTCGCTGAAATGGGCTCACAAAC
TGCAAAAGATATTGAGGAAGATGACATGGACATTAATCTCGAAGACTTTGATTTTCCAAATCCACAAAAAGTGGTCATATATTCAGGAGACCTCATGGATACATTTTGCG
TAGGTATGCGAGAAACTTCGAAAGAAATTGGAAAGATTGCTACATGGCAAAAAGAAAAAATGGAAATAGAATCATACACAAATAATTATATGATGAATTACAAACTATTC
TTGGAATGGACGTGGACGATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAATGAAAGTGCATTGAGGGAGAGAAATTTGTGTTCGATGACTAGGTTAAGAGATAGGGCTACTGGCGGTAGATGTAAGATACTCGCTGAAATGGGCTCACAAAC
TGCAAAAGATATTGAGGAAGATGACATGGACATTAATCTCGAAGACTTTGATTTTCCAAATCCACAAAAAGTGGTCATATATTCAGGAGACCTCATGGATACATTTTGCG
TAGGTATGCGAGAAACTTCGAAAGAAATTGGAAAGATTGCTACATGGCAAAAAGAAAAAATGGAAATAGAATCATACACAAATAATTATATGATGAATTACAAACTATTC
TTGGAATGGACGTGGACGATTGTTTAA
Protein sequenceShow/hide protein sequence
MRNESALRERNLCSMTRLRDRATGGRCKILAEMGSQTAKDIEEDDMDINLEDFDFPNPQKVVIYSGDLMDTFCVGMRETSKEIGKIATWQKEKMEIESYTNNYMMNYKLF
LEWTWTIV