; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005128 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005128
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:13251554..13252246
RNA-Seq ExpressionPI0005128
SyntenyPI0005128
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.4e-6664.71Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS FI  +GEW WPRV  EL++LWERVQ + PCLS+ D WV     + GFSI+SAWEAI PR   V W GLLW GGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS
        AW  I+DR L   +   R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWNERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.5e-5750.22Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS+FIG DGEW+WPRV  EL++LW+RVQ + PCLS+ DRWV     + GFSI+SA + IRPR   V W GLLWGGGN+P+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDRLGTWDKLSR------------VGG---------------------------------WEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN
        AW  I+++LGT D+L R             GG                                 W VELSW+  +GIG  V RKLW VL CA+ YFIW 
Subjt:  AWHVIRDRLGTWDKLSR------------VGG---------------------------------WEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN

Query:  ERNRRLHGGPAREPDILIQCICSTVRARAVS
        E N RLHGG AR   ++ Q IC+ +RAR VS
Subjt:  ERNRRLHGGPAREPDILIQCICSTVRARAVS

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.5e-6353.68Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REA+LS FI  +GEW WPRV  EL++LWERVQ + PCLS+ D WV     + GFSI+SAWEAI PR   V W GLLWGGGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN
        AW  I+DRL T D+L                                              R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWN
Subjt:  AWHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN

Query:  ERNRRLHGGPAREPDILIQCICSTVRARAVS
        ERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  ERNRRLHGGPAREPDILIQCICSTVRARAVS

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]5.4e-6664.17Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS FI  +GEW WPRV  EL++LWERVQ + PCL++ D WV     + GFSI+SAWEAI PR   V W GLLW GGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS
        AW  I+DR L   +   R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWNERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS

XP_031745548.1 uncharacterized protein LOC116405965 [Cucumis sativus]4.5e-5748.7Show/hide
Query:  GERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCA
        G+RV+YD  S  +ARL  F+G DG+WRWP V  +L+++W+RVQG+ P  S+ DRWV        FSI+SAWE IRP S  V W+GLLWGGGNIP+HSFCA
Subjt:  GERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCA

Query:  WHVIRDRLGTWDKLS---------------------------------------------RVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNE
        W  IRDRLGT D+LS                                             R+G W V LSW+  +GIGK V RKLW +LWCA+IYFIW E
Subjt:  WHVIRDRLGTWDKLS---------------------------------------------RVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNE

Query:  RNRRLHGGPAREPDILIQCICSTVRARAVS
        RN RLHGG  REP ++ Q I S ++ARA S
Subjt:  RNRRLHGGPAREPDILIQCICSTVRARAVS

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein1.2e-6664.71Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS FI  +GEW WPRV  EL++LWERVQ + PCLS+ D WV     + GFSI+SAWEAI PR   V W GLLW GGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS
        AW  I+DR L   +   R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWNERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.7e-5750.22Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS+FIG DGEW+WPRV  EL++LW+RVQ + PCLS+ DRWV     + GFSI+SA + IRPR   V W GLLWGGGN+P+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDRLGTWDKLSR------------VGG---------------------------------WEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN
        AW  I+++LGT D+L R             GG                                 W VELSW+  +GIG  V RKLW VL CA+ YFIW 
Subjt:  AWHVIRDRLGTWDKLSR------------VGG---------------------------------WEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN

Query:  ERNRRLHGGPAREPDILIQCICSTVRARAVS
        E N RLHGG AR   ++ Q IC+ +RAR VS
Subjt:  ERNRRLHGGPAREPDILIQCICSTVRARAVS

A0A5A7TZS0 Reverse transcriptase domain-containing protein7.1e-6453.68Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REA+LS FI  +GEW WPRV  EL++LWERVQ + PCLS+ D WV     + GFSI+SAWEAI PR   V W GLLWGGGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN
        AW  I+DRL T D+L                                              R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWN
Subjt:  AWHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWN

Query:  ERNRRLHGGPAREPDILIQCICSTVRARAVS
        ERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  ERNRRLHGGPAREPDILIQCICSTVRARAVS

A0A5A7UP65 Reverse transcriptase2.6e-5046.52Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCA
        +GERV+YDAAS REA LS FIG DGEW WPR                                GFSI+SAWEAIRPR   V W GLLWGGGNIP+HSFCA
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCA

Query:  WHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNE
        W  I+DRLGT D+                                               R+G W VELSW+  +GI KGV RKLW VLWCA+IYFIWNE
Subjt:  WHVIRDRLGTWDKL---------------------------------------------SRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNE

Query:  RNRRLHGGPAREPDILIQCICSTVRARAVS
        RN RLHGG A +P ++   IC+ +RARA S
Subjt:  RNRRLHGGPAREPDILIQCICSTVRARAVS

A0A5D3BDZ6 Zf-RVT domain-containing protein2.6e-6664.17Show/hide
Query:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC
        +GERV+YDAAS REARLS FI  +GEW WPRV  EL++LWERVQ + PCL++ D WV     + GFSI+SAWEAI PR   V W GLLW GGNIP+HSFC
Subjt:  MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVR-GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFC

Query:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS
        AW  I+DR L   +   R+G W VELSW+  +GIGKGV RKLW VLWCA+IYFIWNERN RLHGG AR+P IL   IC+ +RARA S
Subjt:  AWHVIRDR-LGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.4e-1033.04Show/hide
Query:  LSIGDRWVGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHV-LWCAS
        L + D  V  ++  GFS +  W A+RPRSD V WA  +W  G  P+H+F  W    DRL T    +R+  W ++L   +  G+    +    H+ L C  
Subjt:  LSIGDRWVGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHV-LWCAS

Query:  IYFIWNERNRRL
          F+W+  + RL
Subjt:  IYFIWNERNRRL

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-1026.9Show/hide
Query:  VGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVG--------------------------------------
        VG  V +GFS +  W+AIRPR+  + WA  +W  G +P+H+F  W    DRL T  +L+  G                                      
Subjt:  VGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVG--------------------------------------

Query:  --------GWEVELSWV-SRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVR
                 W   LSW+ S       ++RK   V   A IY IW +RN  LH      P I+ + +   +R
Subjt:  --------GWEVELSWV-SRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVR

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.3e-0826.75Show/hide
Query:  SSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKL---------------------------------------SRVGG-----WEVE
        ++ W  + P  + V W   +W  G IP+H+F AW  +R RL T D++                                       SRV       +E  
Subjt:  SSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKL---------------------------------------SRVGG-----WEVE

Query:  LSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVR
        + W+      K V   L  +   AS+Y IW ERN RLH   +R    LI  I S +R
Subjt:  LSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVR

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.9e-1024.85Show/hide
Query:  FSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVG-----------------------------GWEVE------------
        FS    W A+ P+S  V W   +W   ++P+H+F  W V  +RL T D+L   G                              W               
Subjt:  FSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKLSRVG-----------------------------GWEVE------------

Query:  ---LSWVSRKGIGKG---VMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRAR
           L+W+      K    ++R  +H    + +Y IW ERN+RLH G +R  + +++ I   +RAR
Subjt:  ---LSWVSRKGIGKG---VMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRAR

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.6e-0743.14Show/hide
Query:  GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKL
        GFS ++ W  + P  + V W   +W  G IP+H+F +W  IR RL T DKL
Subjt:  GFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGTWDKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGGGTGGTGTATGATGCTGCGAGTAGTAGAGAGGCTAGGTTATCTAAGTTCATTGGCTCGGATGGTGAGTGGAGATGGCCGAGAGTTTACGGGGAGTTACT
TGAGTTGTGGGAGAGGGTTCAGGGTATCTGTCCTTGTTTGAGTATTGGGGATAGATGGGTTGGGTTCCGGGTCGTCAGGGGGTTTTCGATTTCAAGTGCGTGGGAGGCTA
TTCGGCCTAGGAGTGATAACGTTTGTTGGGCTGGTCTTTTGTGGGGTGGGGGGAATATTCCCAGACATTCTTTTTGTGCTTGGCATGTTATTAGGGATAGGTTGGGCACT
TGGGATAAGTTGAGTAGGGTTGGGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAAGGGTATTGGGAAGGGTGTGATGAGGAAGCTTTGGCATGTGCTCTGGTGTGC
TTCTATCTACTTTATTTGGAATGAGCGGAATCGTCGTCTCCATGGTGGTCCGGCTCGTGAGCCTGATATCTTGATTCAGTGTATTTGCTCTACTGTTCGTGCTCGTGCTG
TCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGGGTGGTGTATGATGCTGCGAGTAGTAGAGAGGCTAGGTTATCTAAGTTCATTGGCTCGGATGGTGAGTGGAGATGGCCGAGAGTTTACGGGGAGTTACT
TGAGTTGTGGGAGAGGGTTCAGGGTATCTGTCCTTGTTTGAGTATTGGGGATAGATGGGTTGGGTTCCGGGTCGTCAGGGGGTTTTCGATTTCAAGTGCGTGGGAGGCTA
TTCGGCCTAGGAGTGATAACGTTTGTTGGGCTGGTCTTTTGTGGGGTGGGGGGAATATTCCCAGACATTCTTTTTGTGCTTGGCATGTTATTAGGGATAGGTTGGGCACT
TGGGATAAGTTGAGTAGGGTTGGGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAAGGGTATTGGGAAGGGTGTGATGAGGAAGCTTTGGCATGTGCTCTGGTGTGC
TTCTATCTACTTTATTTGGAATGAGCGGAATCGTCGTCTCCATGGTGGTCCGGCTCGTGAGCCTGATATCTTGATTCAGTGTATTTGCTCTACTGTTCGTGCTCGTGCTG
TCTCCTAG
Protein sequenceShow/hide protein sequence
MGERVVYDAASSREARLSKFIGSDGEWRWPRVYGELLELWERVQGICPCLSIGDRWVGFRVVRGFSISSAWEAIRPRSDNVCWAGLLWGGGNIPRHSFCAWHVIRDRLGT
WDKLSRVGGWEVELSWVSRKGIGKGVMRKLWHVLWCASIYFIWNERNRRLHGGPAREPDILIQCICSTVRARAVS