; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005132 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005132
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr03:17472661..17473691
RNA-Seq ExpressionPI0005132
SyntenyPI0005132
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-5667.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-5667.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-5667.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-5667.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-5667.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.9e-5767.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

A0A5A7TU93 Gag/pol protein4.9e-5767.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

A0A5A7TWB9 Gag/pol protein4.9e-5767.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

A0A5A7V4M1 Gag/pol protein4.9e-5767.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

A0A5D3CPJ6 Gag/pol protein4.9e-5767.74Show/hide
Query:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS
        TV + Y+RW KAN+KAR YIL ++S+VL KKHE+M+T R+IMDSL+EMFGQ S QI  +A+K++Y+AR+NEG SVREHVL+M+V+FNV EMN AV DE S
Subjt:  TVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKS

Query:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK
        QVSFIL+SLP+SFLQFRSN VMNKI Y +T LLNELQ F SLM  +GQK GEANVA S R+F +GS+SGTKS PS S  KK +KKK
Subjt:  QVSFILKSLPKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHS-RRFQKGSSSGTKSAPSFSSTKKIQKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTCGGGGATGCATATGACCGTTGGACAAAGGCCAATGATAAGGCTCGCGTCTACATCTTGGTCAATATGTCTGACGTACTGATCAAGAAACATGAGACCATGGT
CACTATACGTCAGATCATGGACTCTCTTCGAGAGATGTTTGGACAACCGTCCACTCAGATCTGGCAAGAGGCAATTAAACACGTTTATGATGCCCGTTTGAATGAGGGCC
AATCTGTTAGAGAACATGTTCTCGACATGATAGTCAATTTCAACGTAATAGAAATGAACAAAGCGGTCTTTGATGAGAAGAGTCAAGTGTCCTTTATCTTGAAATCTCTT
CCGAAGAGCTTTCTTCAATTCCGTAGCAATACGGTTATGAATAAGATAGAGTACAATATGACTATCCTCCTTAATGAGTTGCAGATTTTTCGGTCTCTTATGAATAATGA
GGGACAAAAAGAAGGAGAGGCAAATGTTGCTCATTCCAGGAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAATCTGCACCTTCATTTTCTAGCACTAAGAAAATCCAGA
AAAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTCGGGGATGCATATGACCGTTGGACAAAGGCCAATGATAAGGCTCGCGTCTACATCTTGGTCAATATGTCTGACGTACTGATCAAGAAACATGAGACCATGGT
CACTATACGTCAGATCATGGACTCTCTTCGAGAGATGTTTGGACAACCGTCCACTCAGATCTGGCAAGAGGCAATTAAACACGTTTATGATGCCCGTTTGAATGAGGGCC
AATCTGTTAGAGAACATGTTCTCGACATGATAGTCAATTTCAACGTAATAGAAATGAACAAAGCGGTCTTTGATGAGAAGAGTCAAGTGTCCTTTATCTTGAAATCTCTT
CCGAAGAGCTTTCTTCAATTCCGTAGCAATACGGTTATGAATAAGATAGAGTACAATATGACTATCCTCCTTAATGAGTTGCAGATTTTTCGGTCTCTTATGAATAATGA
GGGACAAAAAGAAGGAGAGGCAAATGTTGCTCATTCCAGGAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAATCTGCACCTTCATTTTCTAGCACTAAGAAAATCCAGA
AAAAGAAATGA
Protein sequenceShow/hide protein sequence
MTVGDAYDRWTKANDKARVYILVNMSDVLIKKHETMVTIRQIMDSLREMFGQPSTQIWQEAIKHVYDARLNEGQSVREHVLDMIVNFNVIEMNKAVFDEKSQVSFILKSL
PKSFLQFRSNTVMNKIEYNMTILLNELQIFRSLMNNEGQKEGEANVAHSRRFQKGSSSGTKSAPSFSSTKKIQKKK