CuGenDBv2

Gene ID	PI0005153
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein LITTLE ZIPPER 4
Genome location	chr04:5092498..5094056
RNA-Seq Expression	PI0005153
Synteny	PI0005153
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_007027705.2 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao]

4.2e-19

85.14

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSA---NPSNSS
        MERLNS LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSK  ++ +IPDLNLSS+   NPSNSS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSA---NPSNSS

XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]

2.5e-24

98.61

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA ASKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

XP_021639017.1 protein LITTLE ZIPPER 4 isoform X2 [Hevea brasiliensis]

4.2e-19

86.49

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSA---NPSNSS
        MERLNS+LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSK NSKA A  SIPDLNLSS+   NP+NSS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSA---NPSNSS

XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]

1.0e-20

86.84

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSK--AASKSIPDLNLSSA---NPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK  A+SKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSK--AASKSIPDLNLSSA---NPSNSSN

XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]

2.2e-23

95.83

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKA +SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE03 Uncharacterized protein

1.2e-24

98.61

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA ASKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

A0A1S3B7E3 protein LITTLE ZIPPER 4

1.2e-24

98.61

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA ASKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

A0A6J1CT31 protein LITTLE ZIPPER 4

4.8e-21

86.84

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSK--AASKSIPDLNLSSA---NPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK  A+SKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSK--AASKSIPDLNLSSA---NPSNSSN

A0A6J1F606 protein LITTLE ZIPPER 4

1.0e-23

95.83

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKA +SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

A0A6J1J6J7 protein LITTLE ZIPPER 4

1.0e-23

95.83

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKA +SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKA-ASKSIPDLNLSSANPSNSSN

SwissProt top hits

e value

%identity

Alignment

Q56WL5 Protein LITTLE ZIPPER 4

2.7e-13

63.38

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKAASKSIPDLNLSSANPSNSSN
        MERLNS+LYLQNCYI+KENERLRKKAQ+LNQENQ LL ELKQKLSK  + + S    + N ++ + S+S++
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKAASKSIPDLNLSSANPSNSSN

Q9LXI8 Protein LITTLE ZIPPER 3

8.0e-13

82.61

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSK
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSK

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

1.4e-04

53.49

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK
        ME +N +LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK

AT3G52770.1 protein binding

5.7e-14

82.61

Show/hide

Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSK
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAGGCTAAACTCAGAGTTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGATTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCTCTTCT
TTCAGAACTGAAGCAGAAATTATCAAAAGGAAATTCAAAAGCTGCTTCAAAATCAATTCCTGATCTTAATCTTTCCTCTGCAAATCCTTCTAATTCTTCCAATTGA

mRNA sequence

Show/hide mRNA sequence

CTACTACTAGAAGTGCTTCTGTTACAAAAATCCAGATTGTTTTTGTTTACTTCTCTCTCTCTCTCTCTCTCTGCCCAACAAGCCCATCTAAAAAGGGTTTTTTTTTTGGA
ATTTGGTTGATGTAATATTATCATATATTTATCAACCAAATTGTGATCAATCAATAATCAAGTAAGCAAAAGGAAGAAATGGAGAGGCTAAACTCAGAGTTGTACTTGCA
AAACTGTTACATAATGAAGGAAAATGAGAGATTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCTCTTCTTTCAGAACTGAAGCAGAAATTATCAAAAGGAA
ATTCAAAAGCTGCTTCAAAATCAATTCCTGATCTTAATCTTTCCTCTGCAAATCCTTCTAATTCTTCCAATTGAAATCATATAAATATCAATGGAAGAAGAAGAAGAAGA
AGAAAGAAGAACATGTGATGATTGATGATGATATCATGACCCCACTTAAAGTTTATCTTTTTTTAAAATTTTTTTTTATGTTTTTCATTTTTTGTGAATTACCATAGCCA
ACAGTAGCAAGTAGTTCGGGTTTTCAGTTATATAGGACAGTATGTCCTTTAGCATCTTTTTTTTTTTTTTGAATTTCTTATATCTTTT

Protein sequence

Show/hide protein sequence

MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKAASKSIPDLNLSSANPSNSSN

PI0005153 (gene) of Melon (PI 482460) v1 genome