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PI0005156 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005156
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:17529330..17529857
RNA-Seq ExpressionPI0005156
SyntenyPI0005156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033497.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-0778.12Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVKEE
        MCGPSCSGF WN+E KCIIA+KDLFDNWV+++
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVKEE
KAA0056468.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-0682.76Show/hide
Query:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        CGPSC+GF WNDE KCIIA+K+LFDNWVK
Subjt:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-0680Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        M GP+CSGF WNDE+KCIIAEK+LFDNWV+
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
TYK29059.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-0682.76Show/hide
Query:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        CGPSC+GF WNDE KCIIA+K+LFDNWVK
Subjt:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
XP_031739703.1 uncharacterized protein LOC116403241 [Cucumis sativus]6.3e-0780Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        MCGPSCSGF WND+ KCI+AEK+LFDNWV+
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
TrEMBL top hitse value%identityAlignment
A0A5A7UMZ6 Retrotransposon protein8.9e-0782.76Show/hide
Query:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        CGPSC+GF WNDE KCIIA+K+LFDNWVK
Subjt:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
A0A5A7VBC5 Retrotransposon protein3.4e-0676.67Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        MCGP CSGF WNDE KCI+AEK++FD+WVK
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
A0A5A7VKT2 Retrotransposon protein2.0e-0680Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        M GP+CSGF WNDE+KCIIAEK+LFDNWV+
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVK
A0A5D3DTK0 Retrotransposon protein1.8e-0778.12Show/hide
Query:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVKEE
        MCGPSCSGF WN+E KCIIA+KDLFDNWV+++
Subjt:  MCGPSCSGFCWNDEIKCIIAEKDLFDNWVKEE
A0A5D3E057 Retrotransposon protein8.9e-0782.76Show/hide
Query:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
        CGPSC+GF WNDE KCIIA+K+LFDNWVK
Subjt:  CGPSCSGFCWNDEIKCIIAEKDLFDNWVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGCCCATCGTGCAGTGGATTTTGTTGGAACGATGAAATAAAGTGCATCATCGCGGAGAAGGATCTGTTCGACAATTGGGTGAAGGAAGAAGGCGAAAAGAGGAA
TTCTAGGCGATCAACATTGCATTTAGGCGTTCAAATGACCATCTGGCGAACAACCAACACATCACTATGCGATGCTGACGCACTAAGAGACAAGAATGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGCCCATCGTGCAGTGGATTTTGTTGGAACGATGAAATAAAGTGCATCATCGCGGAGAAGGATCTGTTCGACAATTGGGTGAAGGAAGAAGGCGAAAAGAGGAA
TTCTAGGCGATCAACATTGCATTTAGGCGTTCAAATGACCATCTGGCGAACAACCAACACATCACTATGCGATGCTGACGCACTAAGAGACAAGAATGGTAGTTGA
Protein sequenceShow/hide protein sequence
MCGPSCSGFCWNDEIKCIIAEKDLFDNWVKEEGEKRNSRRSTLHLGVQMTIWRTTNTSLCDADALRDKNGS