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PI0005176 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005176
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr07:11486412..11487305
RNA-Seq ExpressionPI0005176
SyntenyPI0005176
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033275.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
KAA0040955.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
KAA0057700.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.6e-2763.92Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSVQ
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSKHNGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS++
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSVQ
TYK09690.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
TrEMBL top hitse value%identityAlignment
A0A5A7SVU3 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
A0A5A7THT5 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
A0A5A7URG0 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-2763.92Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSVQ
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSKHNGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS++
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSVQ
A0A5D3CEC4 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-2663.54Show/hide
Query:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
        P  ++N+K+S+VWDHFE LKGDPNDP   CKY G  YACHSK NGTGTMKHHL NC KYPYQ++RD TQ     + +   GD  +SSQLVCESFS+
Subjt:  PTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGATYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQK----EEEGVTGDCPSSSQLVCESFSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAACATTACATCGTCATCCTTCCTTCATCAACAAGCAACATCGCTGGCCATCACTTACCTCCGTCCATTGTCGTCCACCACCGTCCGTCGCTTCCCTCCCTCC
ATCCACTTTCCTTGCTACATTTGGATACATTATGGAAGTGGAAAAGGAGAAAGTTGTAGATACAATGGAGGCTACTACACAAAAGGTTGATGAACATGAAGGAGGAGTTG
AGAAACCAACAAAAAAACGCAACATGAAAAAATCCATAGTTTGGGACCATTTTGAGCATTTGAAAGGTGATCCTAATGACCCTTATGTTAGTTGTAAATATTTTGGAGCT
ACTTATGCATGTCATTCAAAGCATAATGGTACTGGAACGATGAAACATCACTTAAATAATTGTAATAAATATCCTTACCAAAGGCAGAGAGACCCGACACAAAAAGAAGA
AGAAGGGGTTACGGGGGATTGTCCATCGAGTTCACAACTTGTGTGCGAGTCATTTAGTGTACAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAACATTACATCGTCATCCTTCCTTCATCAACAAGCAACATCGCTGGCCATCACTTACCTCCGTCCATTGTCGTCCACCACCGTCCGTCGCTTCCCTCCCTCC
ATCCACTTTCCTTGCTACATTTGGATACATTATGGAAGTGGAAAAGGAGAAAGTTGTAGATACAATGGAGGCTACTACACAAAAGGTTGATGAACATGAAGGAGGAGTTG
AGAAACCAACAAAAAAACGCAACATGAAAAAATCCATAGTTTGGGACCATTTTGAGCATTTGAAAGGTGATCCTAATGACCCTTATGTTAGTTGTAAATATTTTGGAGCT
ACTTATGCATGTCATTCAAAGCATAATGGTACTGGAACGATGAAACATCACTTAAATAATTGTAATAAATATCCTTACCAAAGGCAGAGAGACCCGACACAAAAAGAAGA
AGAAGGGGTTACGGGGGATTGTCCATCGAGTTCACAACTTGTGTGCGAGTCATTTAGTGTACAGAATTGA
Protein sequenceShow/hide protein sequence
MSATLHRHPSFINKQHRWPSLTSVHCRPPPSVASLPPSTFLATFGYIMEVEKEKVVDTMEATTQKVDEHEGGVEKPTKKRNMKKSIVWDHFEHLKGDPNDPYVSCKYFGA
TYACHSKHNGTGTMKHHLNNCNKYPYQRQRDPTQKEEEGVTGDCPSSSQLVCESFSVQN