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PI0005181 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005181
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationchr08:15814333..15814872
RNA-Seq ExpressionPI0005181
SyntenyPI0005181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1656.65Show/hide
Query:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD
        GR+SGSYVEGGNR I IV V DGS         G YGGWGWDWTFS+VGDT NG    GGGCDV GGGG  + GG G       ++G G+G   G G GD
Subjt:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD

Query:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS
        G+GAS HE GGGGGG  S       GGG +SDHGGGG+       SN  GG   HGGGGGG   D+GGGGG S
Subjt:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS

XP_008450026.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]1.1e-1553.05Show/hide
Query:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET
        G Y+EGGN +         + +NM T  SYGGWGWDWTFSTVGDT NGEG                    G NS EVG GNGG+ G  GG GSG SIHET
Subjt:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET

Query:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS
          G GGGDSGG G+S+H              GGGGTSSND GG    GG GGGGFSD+GGGG S
Subjt:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]1.6e-1455.49Show/hide
Query:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD
        GR+SGSYVEGGNR I IV V DGS         G YGGWGWDWTFS+VGDT NG    GGGCDV GGGG  + GG G       ++G G+G   G G GD
Subjt:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD

Query:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS
        G+GAS HE GGG GG  S       GGG +SD GGGG+       SN  GG   HGGGGGG   D+GGGGG S
Subjt:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS

XP_022966633.1 loricrin-like [Cucurbita maxima]1.2e-1454.4Show/hide
Query:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANG-EGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNG-----SG
        GR+SGSYVEGGNR I IV V DGS         G YGGWGWDWTFS+VGDT NG +GGGCDV GGGG  + GG G   G    VG GNG  NG     +G
Subjt:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANG-EGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNG-----SG

Query:  GGDGS-GASIHETGGGGG--------------GGDSG-GGGISDHGGGGT-SSNDAGG-----NYDHGG-------GGGGGFSDYGGGGGSSF
        GGDG   +S  E GGGGG              GG S  GGG S HGGGG  +S+D GG     +YDHGG       GGGGG  D+GGGGGSSF
Subjt:  GGDGS-GASIHETGGGGG--------------GGDSG-GGGISDHGGGGT-SSNDAGG-----NYDHGG-------GGGGGFSDYGGGGGSSF

XP_023518097.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]3.2e-1551.35Show/hide
Query:  GKSGRESGSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEG---GGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGG
        G  GR+SGS VEGGNR   +V  G          G YGGWGWDWTFS+VGD+ NG G   GGCDV GGGG  + GG GC      +VG G+G     G G
Subjt:  GKSGRESGSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEG---GGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGG

Query:  DGSGASIHETGGGGGGGDS-------GGGGISDHGGGGT--------------SSNDAGG---NYDHGGGGGGGFSDYGGGGGSS
        DG+GAS HE GGG GG  S       GGG +SDHGGGG+              SS+  GG   NYDHGGGGGG   D+GGGGG S
Subjt:  DGSGASIHETGGGGGGGDS-------GGGGISDHGGGGT--------------SSNDAGG---NYDHGGGGGGGFSDYGGGGGSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXB6 Uncharacterized protein1.4e-1349.44Show/hide
Query:  MEKGKSGRESGSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGG
        M  GK   ++G YVEGGN +         + +NM +  SYGGWGWDWTFSTVGDT NG                      G NS EVG GNGGL G GGG
Subjt:  MEKGKSGRESGSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGG

Query:  DGSGASIHETGGGGGGGDSGGGGISDH---------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGSSFG
         GS ASIHET    G GD GGGG+SDH               GGGGTSSND GG    GGGGGGG    GGGGG   G
Subjt:  DGSGASIHETGGGGGGGDSGGGGISDH---------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGSSFG

A0A1S3BNC1 glycine-rich cell wall structural protein 1.0-like5.3e-1653.05Show/hide
Query:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET
        G Y+EGGN +         + +NM T  SYGGWGWDWTFSTVGDT NGEG                    G NS EVG GNGG+ G  GG GSG SIHET
Subjt:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET

Query:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS
          G GGGDSGG G+S+H              GGGGTSSND GG    GG GGGGFSD+GGGG S
Subjt:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS

A0A5A7TNP5 Glycine-rich cell wall structural protein 1.0-like5.3e-1653.05Show/hide
Query:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET
        G Y+EGGN +         + +NM T  SYGGWGWDWTFSTVGDT NGEG                    G NS EVG GNGG+ G  GG GSG SIHET
Subjt:  GSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET

Query:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS
          G GGGDSGG G+S+H              GGGGTSSND GG    GG GGGGFSD+GGGG S
Subjt:  GGGGGGGDSGGGGISDH--------------GGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGS

A0A6J1EUX9 glycine-rich protein 23-like7.7e-1555.49Show/hide
Query:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD
        GR+SGSYVEGGNR I IV V DGS         G YGGWGWDWTFS+VGDT NG    GGGCDV GGGG  + GG G       ++G G+G   G G GD
Subjt:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANGE---GGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGD

Query:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS
        G+GAS HE GGG GG  S       GGG +SD GGGG+       SN  GG   HGGGGGG   D+GGGGG S
Subjt:  GSGASIHETGGGGGGGDS-------GGGGISDHGGGGT------SSNDAGGNYDHGGGGGGGFSDYGGGGGSS

A0A6J1HSN5 loricrin-like5.9e-1554.4Show/hide
Query:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANG-EGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNG-----SG
        GR+SGSYVEGGNR I IV V DGS         G YGGWGWDWTFS+VGDT NG +GGGCDV GGGG  + GG G   G    VG GNG  NG     +G
Subjt:  GRESGSYVEGGNRNIDIVIVGDGS--SNNMSTTGSYGGWGWDWTFSTVGDTANG-EGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNG-----SG

Query:  GGDGS-GASIHETGGGGG--------------GGDSG-GGGISDHGGGGT-SSNDAGG-----NYDHGG-------GGGGGFSDYGGGGGSSF
        GGDG   +S  E GGGGG              GG S  GGG S HGGGG  +S+D GG     +YDHGG       GGGGG  D+GGGGGSSF
Subjt:  GGDGS-GASIHETGGGGG--------------GGDSG-GGGISDHGGGGT-SSNDAGG-----NYDHGG-------GGGGGFSDYGGGGGSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGGTAAAAGTGGGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAATAGAAATATTGACATAGTTATTGTGGGTGATGGGAGCAGCAATAATATGAGTACGAC
AGGCAGTTATGGAGGTTGGGGTTGGGATTGGACTTTTAGTACTGTAGGAGACACAGCCAATGGCGAAGGAGGGGGATGTGATGTCGAAGGTGGCGGTGGTGGCGATGACG
GTGGCGGAGTTGGGTGTTGTGGAGGGAATAGTCATGAGGTTGGAGTTGGAAATGGTGGCCTTAATGGAAGCGGCGGCGGAGATGGCAGTGGAGCGAGTATTCATGAGACA
GGTGGTGGTGGTGGTGGTGGTGATAGCGGAGGTGGAGGCATTTCTGATCATGGAGGTGGAGGAACGAGTTCTAATGATGCCGGAGGAAACTACGATCACGGGGGAGGTGG
TGGTGGAGGGTTTTCTGATTATGGAGGTGGTGGAGGGTCATCTTTTGGTGACCTTCAATCCTTGTCGTTCACTTTTGTTTATACGTTTATTGTAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGGTAAAAGTGGGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAATAGAAATATTGACATAGTTATTGTGGGTGATGGGAGCAGCAATAATATGAGTACGAC
AGGCAGTTATGGAGGTTGGGGTTGGGATTGGACTTTTAGTACTGTAGGAGACACAGCCAATGGCGAAGGAGGGGGATGTGATGTCGAAGGTGGCGGTGGTGGCGATGACG
GTGGCGGAGTTGGGTGTTGTGGAGGGAATAGTCATGAGGTTGGAGTTGGAAATGGTGGCCTTAATGGAAGCGGCGGCGGAGATGGCAGTGGAGCGAGTATTCATGAGACA
GGTGGTGGTGGTGGTGGTGGTGATAGCGGAGGTGGAGGCATTTCTGATCATGGAGGTGGAGGAACGAGTTCTAATGATGCCGGAGGAAACTACGATCACGGGGGAGGTGG
TGGTGGAGGGTTTTCTGATTATGGAGGTGGTGGAGGGTCATCTTTTGGTGACCTTCAATCCTTGTCGTTCACTTTTGTTTATACGTTTATTGTAGCATAA
Protein sequenceShow/hide protein sequence
MEKGKSGRESGSYVEGGNRNIDIVIVGDGSSNNMSTTGSYGGWGWDWTFSTVGDTANGEGGGCDVEGGGGGDDGGGVGCCGGNSHEVGVGNGGLNGSGGGDGSGASIHET
GGGGGGGDSGGGGISDHGGGGTSSNDAGGNYDHGGGGGGGFSDYGGGGGSSFGDLQSLSFTFVYTFIVA