CuGenDBv2

Gene ID	PI0005182
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	60S ribosomal protein L44
Genome location	chr01:25797969..25798849
RNA-Seq Expression	PI0005182
Synteny	PI0005182
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0005506 - iron ion binding (molecular function) GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR000552 - Ribosomal protein L44e IPR011332 - Zinc-binding ribosomal protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA8528926.1 hypothetical protein F0562_033586 [Nyssa sinensis]

1.2e-07

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

KAF8389574.1 hypothetical protein HHK36_024090 [Tetracentron sinense]

1.2e-07

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

KAF9515693.1 hypothetical protein BS47DRAFT_739373 [Hydnum rufescens UP504]

1.7e-09

55.22

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLKESVVMIVNNQDTVDKPSQSFTRRPRLQRR
        MVN+PKT++TYCK K+C+KHT HKVTQYK  +   L +ES     NN   V +PS S TRR R +RR
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLKESVVMIVNNQDTVDKPSQSFTRRPRLQRR

XP_018817362.1 60S ribosomal protein L44 isoform X2 [Juglans regia]

1.2e-07

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

XP_030960161.1 60S ribosomal protein L44-like [Quercus lobata]

1.2e-07

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

TrEMBL top hits

e value

%identity

Alignment

A0A2I0KA77 60S ribosomal protein L44-like

6.0e-08

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

A0A2I4FEU8 60S ribosomal protein L44 isoform X2

6.0e-08

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

A0A5B7C1X2 Uncharacterized protein

6.0e-08

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

A0A5J5AF86 Uncharacterized protein

6.0e-08

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

A0A5J5AGQ5 Uncharacterized protein

6.0e-08

81.58

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L ++
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLK

SwissProt top hits

e value

%identity

Alignment

O23290 60S ribosomal protein L36a

5.2e-09

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKK +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

P31028 60S ribosomal protein L44

2.6e-08

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVNVPKT+KTYCK KECRKHT HKVTQYK  +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

P52809 60S ribosomal protein L44

5.7e-08

74.29

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVNVPKT++TYCK KECRKHT HKVTQYK  +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

Q96499 60S ribosomal protein L44

2.1e-10

88.57

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVNVPKTKKTYCKSKECRKHTLHKVTQYKK +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

Q9UVB8 60S ribosomal protein L44

2.6e-08

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVNVPKT+KTYCK KECRKHT HKVTQYK  +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

Arabidopsis top hits

e value

%identity

Alignment

AT3G23390.1 Zinc-binding ribosomal protein family protein

3.7e-10

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKK +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

AT4G14320.1 Zinc-binding ribosomal protein family protein

3.7e-10

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKK +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

AT4G14320.2 Zinc-binding ribosomal protein family protein

3.7e-10

77.14

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Query:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL
        MVN+PKTK TYCK+KEC+KHTLHKVTQYKK +  L
Subjt:  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVL

Sequences

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CDS sequence

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ATGGTGAACGTTCCCAAGACAAAGAAGACTTACTGCAAGAGCAAGGAATGTAGAAAGCATACCTTGCACAAGGTTACCCAATACAAAAAGGCAAGGACAGTCTTGCTGCT
CAAGGAAAGCGTCGTTATGATCGTAAACAATCAGGATACGGTGGACAAACCAAGCCAGTCTTTCACAAGAAGGCCAAGACTACAAAGAAGATTGTGCTAA

mRNA sequence

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Protein sequence

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MVNVPKTKKTYCKSKECRKHTLHKVTQYKKARTVLLLKESVVMIVNNQDTVDKPSQSFTRRPRLQRRLC

PI0005182 (gene) of Melon (PI 482460) v1 genome