; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005256 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005256
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr04:26041264..26041548
RNA-Seq ExpressionPI0005256
SyntenyPI0005256
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]2.0e-2977.66Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSA QY MD GFT VTRS++R S+I I SPTESSTPPRPS NL+ PSGGV QMRPP SP SN ESSTPPTTYSQAVT +KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.8e-3078.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        +SADQYAMD GFTTVTR  +RS  I I SPTESSTPPRPS NL+ PS GV QMRPP SP SN ESSTPPTTYSQAVTP+KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.3e-3178.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        M++DQYAMD  FTTVTRS++RSS+I+  SPTESSTPPRP ANL+ PSGGV QMRPPTSP SN ESSTPPTTYSQAVTP+KRF+PRP+IK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]1.2e-3280.85Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSADQYAMD GFTTVTRS++RSS+I+IES TESSTPPRPSANL+ P GG  QMRPP SP SN ESSTPPTTYSQ VTP+KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]2.8e-3178.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSADQY MD GFTTV RS++RSS+I+ ESPTESSTPPRP ANL+ PSG V QMRPP SP SN ESSTPPTTYSQAVTP+KRF+PRP+IK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein8.9e-3178.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        +SADQYAMD GFTTVTR  +RS  I I SPTESSTPPRPS NL+ PS GV QMRPP SP SN ESSTPPTTYSQAVTP+KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

A0A5A7URC1 Uncharacterized protein6.2e-3278.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        M++DQYAMD  FTTVTRS++RSS+I+  SPTESSTPPRP ANL+ PSGGV QMRPPTSP SN ESSTPPTTYSQAVTP+KRF+PRP+IK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

A0A5D3BM67 Uncharacterized protein5.6e-3380.85Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSADQYAMD GFTTVTRS++RSS+I+IES TESSTPPRPSANL+ P GG  QMRPP SP SN ESSTPPTTYSQ VTP+KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

A0A5D3CKX1 Uncharacterized protein1.4e-3178.72Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSADQY MD GFTTV RS++RSS+I+ ESPTESSTPPRP ANL+ PSG V QMRPP SP SN ESSTPPTTYSQAVTP+KRF+PRP+IK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

E5GCE6 Uncharacterized protein9.9e-3077.66Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK
        MSA QY MD GFT VTRS++R S+I I SPTESSTPPRPS NL+ PSGGV QMRPP SP SN ESSTPPTTYSQAVT +KRF+PRPEIK+YFQK
Subjt:  MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCTGCCATACAGATTGAATCTCCCACGGAGTCTTCTACTCCACC
TAGGCCTTCGGCCAATCTTGTTTGTCCTTCTGGTGGAGTCACTCAAATGAGGCCTCCTACCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTC
AGGCCGTCACTCCAGAAAAACGATTCATACCAAGACCCGAGATCAAAACATATTTTCAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCTGCCATACAGATTGAATCTCCCACGGAGTCTTCTACTCCACC
TAGGCCTTCGGCCAATCTTGTTTGTCCTTCTGGTGGAGTCACTCAAATGAGGCCTCCTACCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTC
AGGCCGTCACTCCAGAAAAACGATTCATACCAAGACCCGAGATCAAAACATATTTTCAAAAATAA
Protein sequenceShow/hide protein sequence
MSADQYAMDFGFTTVTRSKARSSAIQIESPTESSTPPRPSANLVCPSGGVTQMRPPTSPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQK