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PI0005262 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005262
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposase
Genome locationchr10:5206694..5207989
RNA-Seq ExpressionPI0005262
SyntenyPI0005262
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054128.1 pol protein [Cucumis melo var. makuwa]1.4e-6558.43Show/hide
Query:  RVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVED-------------------------------------
        R R  GERK+VEYNEDGVPIGENGAKLNSFI SCVHYHIPI YA+W DVP ELK KIY IVE                                      
Subjt:  RVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVED-------------------------------------

Query:  ----------------------------------KRKLQEERRKKNKYNHRLSRKGYANLREELDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGG
                                          KRKLQ+ERRKKNKYNHRLSRKGYANLREEL++ISKT  DKE SPND+LTQA  T+ESSGRV GVGG
Subjt:  ----------------------------------KRKLQEERRKKNKYNHRLSRKGYANLREELDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGG

Query:  FVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGS
        FVTP+ YFH AK SK R+EEI+KLS+ENEKLRLR++ELE+I ISTQSTPTSAHGS
Subjt:  FVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGS

KAA0066037.1 hypothetical protein E6C27_scaffold21G00090 [Cucumis melo var. makuwa]5.2e-6049.52Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVTRVRSEGERK+VEYNEDGVPIGENGAKLNSFIGSCVHY+IPI YA+W DVP ELK KIY IV                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  --------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL---------------------------------------DEI
                                  EDKRKLQ+ERRKKNKYNHRLSRKGYANLREEL                                       DEI
Subjt:  --------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL---------------------------------------DEI

Query:  SKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYEIQC
        SKT  DKE SPND+LTQA                        +AK SK R+EEI+KLS+ENEKLRLR++ELE+I ISTQSTPTSAHGS  RPRLEY+IQC
Subjt:  SKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYEIQC

Query:  EKKLK----KEKMNV
        +K ++    KE++NV
Subjt:  EKKLK----KEKMNV

TYK03264.1 transposase [Cucumis melo var. makuwa]3.8e-5545.89Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVT VRSEGERK+VEYNEDGVPIGENGAKLNSFIGSCVHYHIPI YA+W DVP ELK KIY IV                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------
                                             EDKRKLQ+ERRKKNKYNHRLSRKGYANL+EEL                               
Subjt:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------

Query:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY
                DEISKT  DKE SPND+LTQA  T+ESSGRV GVG FVTP+ YFH AK SK R+EEI+KLS ENEKLR +    +++ +             
Subjt:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY

Query:  FRPRLEYEIQCEKKLK
           R E E+ CE  +K
Subjt:  FRPRLEYEIQCEKKLK

TYK30021.1 hypothetical protein E5676_scaffold587G00260 [Cucumis melo var. makuwa]1.2e-7254.19Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVTRVRS+GERK+VEYNEDGVPIGENG KLNSFIGSCVHYHIPI YA+W DVPVE K KIY  V                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------
                                             EDKRKLQ+ERRKKNKYNHRLSRKGYANLREEL                               
Subjt:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------

Query:  DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYE
        DEISKT  DKE SPND+LTQA  T+ESS RV GVGGFVTPT YFH AK SK R+E+I+KLS+ENEKLRL ++ELE+I ISTQSTPTSAHGS  RPRLEY+
Subjt:  DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYE

Query:  IQCEKKLKKE
        IQC+K ++KE
Subjt:  IQCEKKLKKE

XP_031741719.1 uncharacterized protein LOC105435665 [Cucumis sativus]4.2e-6258.26Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVEDKRKLQEERRKK---------NKYNHRLSRKGY
        MFDVT++RSEGERKVVEYN+DGVPIGENG KLNSFIGSCVHYHIPI+Y SW DV +ELK+KIY IVE    +    RK           +Y H L++K  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVEDKRKLQEERRKK---------NKYNHRLSRKGY

Query:  ANLREE------------------LDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELE
           R +                   D+IS+ YVDKE SPND L QA  T E SGRV GVGGFVT TAYFH +K SK +SE IEKL +ENEKL L ++ELE
Subjt:  ANLREE------------------LDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELE

Query:  DICISTQSTPTSAHGSYFRPRLEYEIQCEKKLKKEKMNVTTK
         I ++TQSTPT AH S  RPRLEY+IQ ++KL++EKMN+TTK
Subjt:  DICISTQSTPTSAHGSYFRPRLEYEIQCEKKLKKEKMNVTTK

TrEMBL top hitse value%identityAlignment
A0A5A7TUX7 Transposase1.9e-5545.89Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVT VRSEGERK+VEYNEDGVPIGENGAKLNSFIGSCVHYHIPI YA+W DVP ELK KIY IV                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------
                                             EDKRKLQ+ERRKKNKYNHRLSRKGYANL+EEL                               
Subjt:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------

Query:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY
                DEISKT  DKE SPND+LTQA  T+ESSGRV GVG FVTP+ YFH AK SK R+EEI+KLS ENEKLR +    +++ +             
Subjt:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY

Query:  FRPRLEYEIQCEKKLK
           R E E+ CE  +K
Subjt:  FRPRLEYEIQCEKKLK

A0A5A7UGF9 Pol protein6.8e-6658.43Show/hide
Query:  RVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVED-------------------------------------
        R R  GERK+VEYNEDGVPIGENGAKLNSFI SCVHYHIPI YA+W DVP ELK KIY IVE                                      
Subjt:  RVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVED-------------------------------------

Query:  ----------------------------------KRKLQEERRKKNKYNHRLSRKGYANLREELDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGG
                                          KRKLQ+ERRKKNKYNHRLSRKGYANLREEL++ISKT  DKE SPND+LTQA  T+ESSGRV GVGG
Subjt:  ----------------------------------KRKLQEERRKKNKYNHRLSRKGYANLREELDEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGG

Query:  FVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGS
        FVTP+ YFH AK SK R+EEI+KLS+ENEKLRLR++ELE+I ISTQSTPTSAHGS
Subjt:  FVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGS

A0A5A7VG24 DUF4218 domain-containing protein2.5e-6049.52Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVTRVRSEGERK+VEYNEDGVPIGENGAKLNSFIGSCVHY+IPI YA+W DVP ELK KIY IV                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  --------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL---------------------------------------DEI
                                  EDKRKLQ+ERRKKNKYNHRLSRKGYANLREEL                                       DEI
Subjt:  --------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL---------------------------------------DEI

Query:  SKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYEIQC
        SKT  DKE SPND+LTQA                        +AK SK R+EEI+KLS+ENEKLRLR++ELE+I ISTQSTPTSAHGS  RPRLEY+IQC
Subjt:  SKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYEIQC

Query:  EKKLK----KEKMNV
        +K ++    KE++NV
Subjt:  EKKLK----KEKMNV

A0A5D3BVS7 Transposase1.9e-5545.89Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVT VRSEGERK+VEYNEDGVPIGENGAKLNSFIGSCVHYHIPI YA+W DVP ELK KIY IV                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------
                                             EDKRKLQ+ERRKKNKYNHRLSRKGYANL+EEL                               
Subjt:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------

Query:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY
                DEISKT  DKE SPND+LTQA  T+ESSGRV GVG FVTP+ YFH AK SK R+EEI+KLS ENEKLR +    +++ +             
Subjt:  --------DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSY

Query:  FRPRLEYEIQCEKKLK
           R E E+ CE  +K
Subjt:  FRPRLEYEIQCEKKLK

A0A5D3E359 Uncharacterized protein5.7e-7354.19Show/hide
Query:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------
        MFDVTRVRS+GERK+VEYNEDGVPIGENG KLNSFIGSCVHYHIPI YA+W DVPVE K KIY  V                                  
Subjt:  MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIV----------------------------------

Query:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------
                                             EDKRKLQ+ERRKKNKYNHRLSRKGYANLREEL                               
Subjt:  -------------------------------------EDKRKLQEERRKKNKYNHRLSRKGYANLREEL-------------------------------

Query:  DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYE
        DEISKT  DKE SPND+LTQA  T+ESS RV GVGGFVTPT YFH AK SK R+E+I+KLS+ENEKLRL ++ELE+I ISTQSTPTSAHGS  RPRLEY+
Subjt:  DEISKTYVDKELSPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYE

Query:  IQCEKKLKKE
        IQC+K ++KE
Subjt:  IQCEKKLKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAAGTAGTGGAATACAATGAAGATGGAGTACCCATTGGAGAAAATGGGGCGAAGCTAAACTCTTTCATTGG
GTCTTGTGTACACTACCACATCCCCATTAACTATGCATCCTGGAGAGATGTGCCTGTTGAATTGAAGAACAAGATCTATAACATAGTTGAGGACAAAAGAAAACTTCAAG
AAGAGAGACGGAAGAAGAACAAGTATAACCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGGGAGGAATTGGATGAGATCTCAAAGACTTATGTTGACAAAGAGCTG
TCTCCAAACGATATTTTGACACAAGCTTTCGATACACAAGAGAGTAGTGGACGTGTATGTGGTGTTGGCGGGTTTGTCACCCCAACTGCTTACTTCCACATAGCGAAATG
CTCAAAGAACCGAAGTGAAGAAATTGAGAAGCTTAGTAAAGAGAATGAAAAGCTTCGTTTGCGACTTAAAGAATTAGAGGATATTTGCATATCAACACAATCTACACCGA
CATCTGCACATGGATCTTACTTCAGACCAAGATTGGAATATGAGATTCAATGTGAAAAAAAGCTAAAAAAGGAGAAAATGAATGTGACAACGAAGGTTGTTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAAGTAGTGGAATACAATGAAGATGGAGTACCCATTGGAGAAAATGGGGCGAAGCTAAACTCTTTCATTGG
GTCTTGTGTACACTACCACATCCCCATTAACTATGCATCCTGGAGAGATGTGCCTGTTGAATTGAAGAACAAGATCTATAACATAGTTGAGGACAAAAGAAAACTTCAAG
AAGAGAGACGGAAGAAGAACAAGTATAACCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGGGAGGAATTGGATGAGATCTCAAAGACTTATGTTGACAAAGAGCTG
TCTCCAAACGATATTTTGACACAAGCTTTCGATACACAAGAGAGTAGTGGACGTGTATGTGGTGTTGGCGGGTTTGTCACCCCAACTGCTTACTTCCACATAGCGAAATG
CTCAAAGAACCGAAGTGAAGAAATTGAGAAGCTTAGTAAAGAGAATGAAAAGCTTCGTTTGCGACTTAAAGAATTAGAGGATATTTGCATATCAACACAATCTACACCGA
CATCTGCACATGGATCTTACTTCAGACCAAGATTGGAATATGAGATTCAATGTGAAAAAAAGCTAAAAAAGGAGAAAATGAATGTGACAACGAAGGTTGTTAAATAG
Protein sequenceShow/hide protein sequence
MFDVTRVRSEGERKVVEYNEDGVPIGENGAKLNSFIGSCVHYHIPINYASWRDVPVELKNKIYNIVEDKRKLQEERRKKNKYNHRLSRKGYANLREELDEISKTYVDKEL
SPNDILTQAFDTQESSGRVCGVGGFVTPTAYFHIAKCSKNRSEEIEKLSKENEKLRLRLKELEDICISTQSTPTSAHGSYFRPRLEYEIQCEKKLKKEKMNVTTKVVK