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PI0005268 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005268
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:17894666..17895022
RNA-Seq ExpressionPI0005268
SyntenyPI0005268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-3777.39Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGI+IR+NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

KAA0044953.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.8e-3878.26Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIIIR+NPLFDNST ASNL +KESHLEVVFVMM DVT EATMAE +RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        E SQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

KAA0054701.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-3775.42Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQ   LT KIWEQLMESPKGGI I+ENPLFD ST AS+  E+ESHLEVV VMM DVT EATM EM+RKINFL+KV+E+RDH+IA LKD MKA EIV
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGKATL
        +S +TP VKANDKGKA L
Subjt:  ESSQTPAVKANDKGKATL

TYK04575.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-3778.26Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIIIR+NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

TYK23838.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.1e-3877.39Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIII +NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA+E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein5.5e-3877.39Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGI+IR+NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

A0A5A7TN64 Ty3-gypsy retrotransposon protein4.2e-3878.26Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIIIR+NPLFDNST ASNL +KESHLEVVFVMM DVT EATMAE +RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        E SQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

A0A5A7UMC9 Ty3-gypsy retrotransposon protein5.5e-3875.42Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQ   LT KIWEQLMESPKGGI I+ENPLFD ST AS+  E+ESHLEVV VMM DVT EATM EM+RKINFL+KV+E+RDH+IA LKD MKA EIV
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGKATL
        +S +TP VKANDKGKA L
Subjt:  ESSQTPAVKANDKGKATL

A0A5D3BZH8 Ty3-gypsy retrotransposon protein5.5e-3878.26Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIIIR+NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

A0A5D3DK07 Ty3-gypsy retrotransposon protein2.5e-3877.39Show/hide
Query:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV
        MQEQEQG+ L  K  EQL+ESPKGGIII +NPLF+NST ASNL +KESHLEVV VMM DVT EATMAEM+RKINFL+KVVE+RDHEIA LKD MKA+E  
Subjt:  MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIV

Query:  ESSQTPAVKANDKGK
        ESSQTP VKA DKGK
Subjt:  ESSQTPAVKANDKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACAAGAACAAGGTTACGCCCTCACAAACAAAATTTGGGAACAACTGATGGAATCTCCTAAAGGCGGGATCATCATCAGAGAGAATCCTTTGTTCGACAACTC
TACTCTTGCTTCTAATCTATTAGAGAAAGAATCACACCTTGAAGTAGTGTTTGTCATGATGGAAGACGTAACAGATGAGGCAACCATGGCAGAGATGAAGAGGAAAATAA
ATTTTCTAATAAAAGTTGTCGAGAAGCGAGATCATGAAATTGCTACCTTGAAAGATCATATGAAGGCTCATGAAATTGTTGAGTCAAGCCAAACTCCCGCTGTCAAAGCT
AATGATAAAGGAAAAGCTACGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACAAGAACAAGGTTACGCCCTCACAAACAAAATTTGGGAACAACTGATGGAATCTCCTAAAGGCGGGATCATCATCAGAGAGAATCCTTTGTTCGACAACTC
TACTCTTGCTTCTAATCTATTAGAGAAAGAATCACACCTTGAAGTAGTGTTTGTCATGATGGAAGACGTAACAGATGAGGCAACCATGGCAGAGATGAAGAGGAAAATAA
ATTTTCTAATAAAAGTTGTCGAGAAGCGAGATCATGAAATTGCTACCTTGAAAGATCATATGAAGGCTCATGAAATTGTTGAGTCAAGCCAAACTCCCGCTGTCAAAGCT
AATGATAAAGGAAAAGCTACGTTGTAG
Protein sequenceShow/hide protein sequence
MQEQEQGYALTNKIWEQLMESPKGGIIIRENPLFDNSTLASNLLEKESHLEVVFVMMEDVTDEATMAEMKRKINFLIKVVEKRDHEIATLKDHMKAHEIVESSQTPAVKA
NDKGKATL