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PI0005307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr04:20966037..20966312
RNA-Seq ExpressionPI0005307
SyntenyPI0005307
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]6.6e-2571.43Show/hide
Query:  KFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI
        +F  DD+  S IESL W+YCEE+VY +LF+ EEFFEEED +YILKEVN+VSGER  ESLDLQTKG+KKTKPSIEEPP+LEL  +
Subjt:  KFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]7.7e-2673.49Show/hide
Query:  FHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI
        F  DD+NC+ IE LGWNY E++ Y +LFS EEFFEE+DP+YILKEVNVVS E+K ESLDLQ KGEKKTKPSIEEPPELEL  +
Subjt:  FHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.4e-2268.29Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF A+D   + IESLGW+YC+E+ Y +LFS EEFFEEEDP+YIL+EVNV+ G+ K ESLDL+TKG+KK K SIEEPPE+EL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]1.5e-2169.51Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF  DDKN + I+S GW Y +E+VY +LFS +EFFEEEDPNYIL+E N +SGERK ESLDLQ KG+KK KPSIEE  ELEL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

TYK25882.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.0e-2167.07Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF ++ +NC+ I+SLGW+YCEE+V +KLF PEEFF+EED  YI KEVNVVSG RK E+ D QTKG +K K SIEE PELEL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein3.2e-2571.43Show/hide
Query:  KFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI
        +F  DD+  S IESL W+YCEE+VY +LF+ EEFFEEED +YILKEVN+VSGER  ESLDLQTKG+KKTKPSIEEPP+LEL  +
Subjt:  KFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI

A0A5A7UE99 Uncharacterized protein6.6e-2368.29Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF A+D   + IESLGW+YC+E+ Y +LFS EEFFEEEDP+YIL+EVNV+ G+ K ESLDL+TKG+KK K SIEEPPE+EL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

A0A5A7UF79 Uncharacterized protein3.8e-2673.49Show/hide
Query:  FHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI
        F  DD+NC+ IE LGWNY E++ Y +LFS EEFFEE+DP+YILKEVNVVS E+K ESLDLQ KGEKKTKPSIEEPPELEL  +
Subjt:  FHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEI

A0A5D3C2R8 Uncharacterized protein7.3e-2269.51Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF  DDKN + I+S GW Y +E+VY +LFS +EFFEEEDPNYIL+E N +SGERK ESLDLQ KG+KK KPSIEE  ELEL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

A0A5D3DQS7 Transposon Ty3-G Gag-Pol polyprotein9.6e-2267.07Show/hide
Query:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL
        MKF ++ +NC+ I+SLGW+YCEE+V +KLF PEEFF+EED  YI KEVNVVSG RK E+ D QTKG +K K SIEE PELEL
Subjt:  MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCACGCTGATGATAAAAACTGCAGCGGAATAGAATCCCTTGGGTGGAATTATTGTGAGGAAAAAGTATATTCTAAATTGTTCAGCCCTGAAGAATTCTTCGA
AGAGGAAGACCCTAATTATATTCTGAAAGAAGTGAATGTCGTGTCTGGCGAAAGGAAGTTAGAGTCTTTGGATCTGCAAACCAAAGGCGAGAAGAAGACAAAACCATCAA
TTGAAGAACCACCAGAATTAGAGCTACCTGAAATATGCATATTTGGGGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCACGCTGATGATAAAAACTGCAGCGGAATAGAATCCCTTGGGTGGAATTATTGTGAGGAAAAAGTATATTCTAAATTGTTCAGCCCTGAAGAATTCTTCGA
AGAGGAAGACCCTAATTATATTCTGAAAGAAGTGAATGTCGTGTCTGGCGAAAGGAAGTTAGAGTCTTTGGATCTGCAAACCAAAGGCGAGAAGAAGACAAAACCATCAA
TTGAAGAACCACCAGAATTAGAGCTACCTGAAATATGCATATTTGGGGGAGAATGA
Protein sequenceShow/hide protein sequence
MKFHADDKNCSGIESLGWNYCEEKVYSKLFSPEEFFEEEDPNYILKEVNVVSGERKLESLDLQTKGEKKTKPSIEEPPELELPEICIFGGE