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PI0005308 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005308
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein IDA-LIKE 2
Genome locationchr08:18514825..18515622
RNA-Seq ExpressionPI0005308
SyntenyPI0005308
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7998278.1 hypothetical protein FH972_002837 [Carpinus fangiana]8.1e-1273.47Show/hide
Query:  SALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +++FK KP   N+ + GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  SALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KAE8647464.1 hypothetical protein Csa_004278 [Cucumis sativus]5.9e-5596.64Show/hide
Query:  MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNK---QQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIP
        MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNK   QQQQQESAL KLKPKNGNNYYYGHFFGFLPRRIPIP
Subjt:  MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNK---QQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIP

Query:  ASGPSRKHNDIGLRSWRSP
        ASGPSRKHNDIGLRSWRSP
Subjt:  ASGPSRKHNDIGLRSWRSP

KAF3970106.1 hypothetical protein CMV_006161 [Castanea mollissima]6.2e-1278.72Show/hide
Query:  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +FK KPK   + Y GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KAG7034431.1 Protein IDA-LIKE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1758.06Show/hide
Query:  RKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        R + ++WM  L++MLLMN E   L+ICCN             + +  FKLKPK  ++  YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  RKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

PRQ49277.1 hypothetical protein RchiOBHm_Chr2g0120121 [Rosa chinensis]5.4e-1655.17Show/hide
Query:  WMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        W+ L  I +L+N        C + S  I     Q+QQE  +FK+KPK  N+ Y GHF GFLPRRIPIPASGPSRKHN IGL++WRSP
Subjt:  WMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ3 Uncharacterized protein2.9e-3995.51Show/hide
Query:  MMLLIIMLLMNEEDELLMICCNASSPIATNK---QQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        MMLLIIMLLMNEEDELLMICCNASSPIATNK   QQQQQESAL KLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
Subjt:  MMLLIIMLLMNEEDELLMICCNASSPIATNK---QQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A2P6RS79 Uncharacterized protein2.6e-1655.17Show/hide
Query:  WMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        W+ L  I +L+N        C + S  I     Q+QQE  +FK+KPK  N+ Y GHF GFLPRRIPIPASGPSRKHN IGL++WRSP
Subjt:  WMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A438DB94 Protein IDA-like 45.1e-1270.59Show/hide
Query:  QESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        + S +FKLKP++ N+   GHF GFLPR +PIPASGPSRKHNDIGL+SWRSP
Subjt:  QESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A5N6QG36 Uncharacterized protein3.9e-1273.47Show/hide
Query:  SALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +++FK KP   N+ + GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  SALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A7N2LYR6 Uncharacterized protein3.0e-1278.72Show/hide
Query:  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +FK KPK   + Y GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  LFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

SwissProt top hitse value%identityAlignment
Q6DUW6 Protein IDA-LIKE 43.3e-0851.92Show/hide
Query:  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        S++F   P    + N    GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Subjt:  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

Q6DUW7 Protein IDA-LIKE 35.9e-0531.73Show/hide
Query:  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCN-ASSPIATNKQQQQQESALFKLKPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLR
        S    RSRK  ++  + ++++LL      +L+ CCN A +    N     ++  +      + ++    H    F G LPR+ P+P SGPSRKHN+IGL 
Subjt:  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCN-ASSPIATNKQQQQQESALFKLKPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLR

Query:  SWRS
        S ++
Subjt:  SWRS

Q6DUW8 Protein IDA-LIKE 52.9e-0432.35Show/hide
Query:  KVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIGLRSW
        K I  MM+L++M++M     +    C A S    +   + Q    FK++  N  N+++ +            F GFLP+ +PIP S PSRKHN  GL+  
Subjt:  KVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIGLRSW

Query:  RS
         S
Subjt:  RS

Q6DUW9 Protein IDA-LIKE 28.2e-0735.92Show/hide
Query:  SRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGL
        SR++    +    +S+    I++LL+     LL+  CN +          +  + +F  KP   +N         F GFLPR  P+PASGPSRKHNDIGL
Subjt:  SRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGL

Query:  RSW
         SW
Subjt:  RSW

Arabidopsis top hitse value%identityAlignment
AT1G76952.1 inflorescence deficient in abscission (IDA)-like 52.1e-0532.35Show/hide
Query:  KVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIGLRSW
        K I  MM+L++M++M     +    C A S    +   + Q    FK++  N  N+++ +            F GFLP+ +PIP S PSRKHN  GL+  
Subjt:  KVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGH------------FFGFLPRRIPIPASGPSRKHNDIGLRSW

Query:  RS
         S
Subjt:  RS

AT3G18715.1 inflorescence deficient in abscission (IDA)-like 42.4e-0951.92Show/hide
Query:  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        S++F   P    + N    GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Subjt:  SALFKLKPK---NGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

AT5G09805.1 inflorescence deficient in abscission (IDA)-like 34.2e-0631.73Show/hide
Query:  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCN-ASSPIATNKQQQQQESALFKLKPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLR
        S    RSRK  ++  + ++++LL      +L+ CCN A +    N     ++  +      + ++    H    F G LPR+ P+P SGPSRKHN+IGL 
Subjt:  SRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCN-ASSPIATNKQQQQQESALFKLKPKNGNNYYYGH----FFGFLPRRIPIPASGPSRKHNDIGLR

Query:  SWRS
        S ++
Subjt:  SWRS

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 25.8e-0835.92Show/hide
Query:  SRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGL
        SR++    +    +S+    I++LL+     LL+  CN +          +  + +F  KP   +N         F GFLPR  P+PASGPSRKHNDIGL
Subjt:  SRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYG----HFFGFLPRRIPIPASGPSRKHNDIGL

Query:  RSW
         SW
Subjt:  RSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGATGATCATGTTTGTTGTTTGTAGAAGAAGATCAAGATCAAGATCAAAATCAAGATCACGAAAGAAGGTTATTAGTTGGATGATGTTGTTAATAATAAT
GTTATTGATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAACAACAAGAATCTGCCTTGTTCAAATTGA
AGCCTAAAAATGGTAATAATTATTATTATGGCCATTTCTTTGGTTTCTTGCCTAGAAGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTA
AGAAGTTGGAGATCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTTTTTGTTCCTTCATAAACCAAAAATCCAATTTTGAACATCATCCTCTTCTAGAAGAGAGAAAATCAATCTTAAA
TTGAAGAAGAAGAAGAAGATGATGATGATGATGATCATGTTTGTTGTTTGTAGAAGAAGATCAAGATCAAGATCAAAATCAAGATCACGAAAGAAGGTTATTAGTTGGAT
GATGTTGTTAATAATAATGTTATTGATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAACAACAAGAAT
CTGCCTTGTTCAAATTGAAGCCTAAAAATGGTAATAATTATTATTATGGCCATTTCTTTGGTTTCTTGCCTAGAAGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAA
CACAATGATATTGGCTTAAGAAGTTGGAGATCTCCTTGAAATAATATTCATCAATCAAATTTATTACATTTTTTTCCCTTCTTCATAGTTGTAGTACTAAAAGGTTCATC
AATCATCATCTCTCATCTTCTTTATCATTTTTCTTGTTTTTTTTTTTTGGGGAACAAATATTTTGAGACATGGGTTGATATTGTACATCGGATTGTTTCATGGGGTTTAG
TTTAAAAATTTCTTTTTTTTTTTTGGTTGTTTAAAATGTTTCACAAGTACAATGCTAGCTTTTTGATATATATCTCAGATGCATATATATATATATATATGTATCTATGT
AATCTAATGGATGCATGTTTAATTTCTA
Protein sequenceShow/hide protein sequence
MMMMMIMFVVCRRRSRSRSKSRSRKKVISWMMLLIIMLLMNEEDELLMICCNASSPIATNKQQQQQESALFKLKPKNGNNYYYGHFFGFLPRRIPIPASGPSRKHNDIGL
RSWRSP