; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005321 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005321
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description3'-5' exonuclease domain-containing protein
Genome locationchr07:1132034..1133581
RNA-Seq ExpressionPI0005321
SyntenyPI0005321
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8367793.1 hypothetical protein BUALT_Bualt16G0109700 [Buddleja alternifolia]5.2e-1029.9Show/hide
Query:  NEYIVLFCGREMTTSVIQNSGRLAVWIRDV--------PTTVIGIDVRFHR--NRPVI-----LTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVG
        N Y V+F G+ + T+V Q+    A WI +V         + ++G+D  +    NR ++     L L VGH C + +L    S   SL  FL+N +YTFVG
Subjt:  NEYIVLFCGREMTTSVIQNSGRLAVWIRDV--------PTTVIGIDVRFHR--NRPVI-----LTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVG

Query:  LNIDYLAQELNQRFRLNIAVR-LELRNFA----------PIGFHHIRFYHLAEQLDLILHPER--RSRWNERHLAHYQIMYTAANAFIAYEIGR
        + I+   ++L + + L  + R ++LR+ A            G   +    L ++L+    P+R   SRW+ + L   Q+ Y   +AF+ +EIGR
Subjt:  LNIDYLAQELNQRFRLNIAVR-LELRNFA----------PIGFHHIRFYHLAEQLDLILHPER--RSRWNERHLAHYQIMYTAANAFIAYEIGR

PSS33560.1 Werner Syndrome-like [Actinidia chinensis var. chinensis]1.5e-0927.55Show/hide
Query:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP--------TTVIGIDV------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNA
        E+     N Y V F   ++ T V      +  WI ++         + ++G+D+      R+H N    L L VG  C + +L       QSL +FL N 
Subjt:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP--------TTVIGIDV------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNA

Query:  SYTFVGLNIDYLAQELNQRFRLNIAVRLELRNF--APIGFHHIRFYHLAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR
         YTFVG+ +D   ++L   + +++A  ++LR+   A  G   +R   L +    +L  E         SRW+  +L+  Q+ Y   +AF+++EIGR
Subjt:  SYTFVGLNIDYLAQELNQRFRLNIAVRLELRNF--APIGFHHIRFYHLAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR

VFQ92171.1 unnamed protein product [Cuscuta campestris]1.0e-1030.89Show/hide
Query:  YIVLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVGLN
        Y V F GR + T V   S R+  WI        R +   V+G+DV       R   N    L L VGH C + +L  C     +L RFL++++YTFVG+ 
Subjt:  YIVLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVGLN

Query:  IDYLAQELNQRFRLNIAVRLELRNFAP----------IGFHHIRFYHLAEQLDLILHPER--RSRWNERHLAHYQIMYTAANAFIAYEIGR
        I    + L Q + L +A  ++LR  A           +G  H+   ++  ++D    P R   S W    L   QI Y   +A++++EIGR
Subjt:  IDYLAQELNQRFRLNIAVRLELRNFAP----------IGFHHIRFYHLAEQLDLILHPER--RSRWNERHLAHYQIMYTAANAFIAYEIGR

XP_021745754.1 Werner Syndrome-like exonuclease [Chenopodium quinoa]5.2e-1031.96Show/hide
Query:  QNEYI-VLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRL---TRCGSQSLNRFLNNASYT
        QN Y+ V F    + T+V  ++  +  WI        R +   V+G+D+       R+ RN   +L L VGH C V +L   TR   Q L  FL N  YT
Subjt:  QNEYI-VLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRL---TRCGSQSLNRFLNNASYT

Query:  FVGLNIDYLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR
        FVG+ ID   Q+L Q + L++   ++LR           F +     LA   LDL    +R    S W++ +L+  Q+ Y A +AF+++EIG++
Subjt:  FVGLNIDYLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR

XP_021749087.1 Werner Syndrome-like exonuclease [Chenopodium quinoa]3.6e-1131.02Show/hide
Query:  VLFCGREMTTSVIQNSGRLAVWIRDVPT--------TVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNASYTFVGLNID
        V F    + T+V  ++  +  WI  V           V+G+D+       R+ RN   +L L VGH C V +L       ++L  FL N  YTFVG+ ID
Subjt:  VLFCGREMTTSVIQNSGRLAVWIRDVPT--------TVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNASYTFVGLNID

Query:  YLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR
           Q+LNQ + L +   ++LR          GF +     LA   LDL+   +R    S W++ +L+  Q+ Y+A +AF+++EIG++
Subjt:  YLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR

TrEMBL top hitse value%identityAlignment
A0A251SD43 Putative polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0929.47Show/hide
Query:  NEYIVLFCGREMTTSVIQNSGRLAVWIRDVPTT--------VIGIDVRF-------HRNRPVILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVG
        N Y++ F    + T V      +  WI  +  T        ++G+DV +       H+N    L L VG+ C + ++    S  QSL  FL N SYTFVG
Subjt:  NEYIVLFCGREMTTSVIQNSGRLAVWIRDVPTT--------VIGIDVRF-------HRNRPVILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYTFVG

Query:  LNIDYLAQELNQRFRLNIAVRLELRNFAPIGFHHIRFYH--LAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR
        + I+   Q+L     L +A R++LR+ A   +  + F +  L +   ++L  E         S W+ + L   Q+ Y A +AF+++EIGR
Subjt:  LNIDYLAQELNQRFRLNIAVRLELRNFAPIGFHHIRFYH--LAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR

A0A2R6RU74 Werner Syndrome-like7.3e-1027.55Show/hide
Query:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP--------TTVIGIDV------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNA
        E+     N Y V F   ++ T V      +  WI ++         + ++G+D+      R+H N    L L VG  C + +L       QSL +FL N 
Subjt:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP--------TTVIGIDV------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNA

Query:  SYTFVGLNIDYLAQELNQRFRLNIAVRLELRNF--APIGFHHIRFYHLAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR
         YTFVG+ +D   ++L   + +++A  ++LR+   A  G   +R   L +    +L  E         SRW+  +L+  Q+ Y   +AF+++EIGR
Subjt:  SYTFVGLNIDYLAQELNQRFRLNIAVRLELRNF--APIGFHHIRFYHLAEQLDLILHPE-------RRSRWNERHLAHYQIMYTAANAFIAYEIGR

A0A5C7IMB6 3'-5' exonuclease domain-containing protein1.3e-0931.09Show/hide
Query:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP----TTVIGIDV----RFHRNR--PV-ILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYT
        E+     N Y V F  +++ T V  +   +  WI ++      +++G DV     F RN+  PV  L L VG  C V +L    +  +SL  FL N +YT
Subjt:  EIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVP----TTVIGIDV----RFHRNR--PV-ILTLSVGHLCAVIRLTRCGS--QSLNRFLNNASYT

Query:  FVGLNIDYLAQELNQRFRLNIAVRLELRNFA-----PIGFHHIRFYHLA-EQLDLILHPER---RSRWNERHLAHYQIMYTAANAFIAYEIGR
        FVG+ ID   ++L + + L +  R++LR  A      +G  +     L+ E L L +   +    SRW+ + L+  QI Y   +AF+++EIGR
Subjt:  FVGLNIDYLAQELNQRFRLNIAVRLELRNFA-----PIGFHHIRFYHLA-EQLDLILHPER---RSRWNERHLAHYQIMYTAANAFIAYEIGR

A0A803LT62 Uncharacterized protein1.3e-0931.38Show/hide
Query:  VLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRL---TRCGSQSLNRFLNNASYTFVGLNI
        V F    + T+V  ++  +  WI        R +   V+G+D+       R+ RN   +L L VGH C V +L   TR   Q L  FL N  YTFVG+ I
Subjt:  VLFCGREMTTSVIQNSGRLAVWI--------RDVPTTVIGIDV-------RFHRNRPVILTLSVGHLCAVIRL---TRCGSQSLNRFLNNASYTFVGLNI

Query:  DYLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR
        D   Q+L Q + L++   ++LR           F +     LA   LDL    +R    S W++ +L+  Q+ Y A +AF+++EIG++
Subjt:  DYLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR

A0A803LZY6 Uncharacterized protein1.7e-1131.02Show/hide
Query:  VLFCGREMTTSVIQNSGRLAVWIRDVPT--------TVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNASYTFVGLNID
        V F    + T+V  ++  +  WI  V           V+G+D+       R+ RN   +L L VGH C V +L       ++L  FL N  YTFVG+ ID
Subjt:  VLFCGREMTTSVIQNSGRLAVWIRDVPT--------TVIGIDV-------RFHRNRPVILTLSVGHLCAVIRLTRCG--SQSLNRFLNNASYTFVGLNID

Query:  YLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR
           Q+LNQ + L +   ++LR          GF +     LA   LDL+   +R    S W++ +L+  Q+ Y+A +AF+++EIG++
Subjt:  YLAQELNQRFRLNIAVRLELRNFAPI-----GFHHIRFYHLA-EQLDLILHPERR---SRWNERHLAHYQIMYTAANAFIAYEIGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAATCCGGAGCACACGTCAGAATGAATATATAGTATTGTTCTGTGGACGTGAAATGACGACTTCAGTTATCCAAAACTCCGGAAGATTAGCGGTATGGATTAG
AGATGTTCCGACTACTGTTATTGGAATCGACGTGAGGTTTCACCGTAATAGGCCGGTGATCCTAACTCTTTCGGTTGGACACCTTTGTGCTGTTATCCGATTGACGCGTT
GTGGTAGTCAGTCTTTAAATAGGTTTCTAAACAATGCTTCTTATACCTTTGTTGGACTGAATATTGATTATCTAGCCCAAGAACTCAATCAACGTTTTCGGCTGAACATT
GCGGTGAGGCTTGAGCTCCGAAATTTTGCTCCCATTGGATTTCATCACATTCGATTTTATCACCTGGCCGAGCAATTGGATCTCATCCTCCATCCTGAAAGGAGGAGCAG
ATGGAACGAAAGGCATCTGGCTCACTATCAAATCATGTACACTGCTGCTAATGCTTTCATAGCGTATGAAATTGGGAGACGGCACCTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAATCCGGAGCACACGTCAGAATGAATATATAGTATTGTTCTGTGGACGTGAAATGACGACTTCAGTTATCCAAAACTCCGGAAGATTAGCGGTATGGATTAG
AGATGTTCCGACTACTGTTATTGGAATCGACGTGAGGTTTCACCGTAATAGGCCGGTGATCCTAACTCTTTCGGTTGGACACCTTTGTGCTGTTATCCGATTGACGCGTT
GTGGTAGTCAGTCTTTAAATAGGTTTCTAAACAATGCTTCTTATACCTTTGTTGGACTGAATATTGATTATCTAGCCCAAGAACTCAATCAACGTTTTCGGCTGAACATT
GCGGTGAGGCTTGAGCTCCGAAATTTTGCTCCCATTGGATTTCATCACATTCGATTTTATCACCTGGCCGAGCAATTGGATCTCATCCTCCATCCTGAAAGGAGGAGCAG
ATGGAACGAAAGGCATCTGGCTCACTATCAAATCATGTACACTGCTGCTAATGCTTTCATAGCGTATGAAATTGGGAGACGGCACCTTCTTTAAGAGAGACAATCGTCAT
TTTTACTACAAAAGGTATCAACGGTTTCTCTAGATGTTCTCACTGGACGTTGGTTTATGAGATAGTTTTTGTGTAGTGTGAAGAATTATGTGTATTTGATTGTTGGTTTA
TGAGA
Protein sequenceShow/hide protein sequence
MLEIRSTRQNEYIVLFCGREMTTSVIQNSGRLAVWIRDVPTTVIGIDVRFHRNRPVILTLSVGHLCAVIRLTRCGSQSLNRFLNNASYTFVGLNIDYLAQELNQRFRLNI
AVRLELRNFAPIGFHHIRFYHLAEQLDLILHPERRSRWNERHLAHYQIMYTAANAFIAYEIGRRHLL