; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005322 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005322
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:17423140..17424109
RNA-Seq ExpressionPI0005322
SyntenyPI0005322
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]3.8e-5850.72Show/hide
Query:  GEILCPQKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRA
        GE  CP  F+  ++++N    TT  EE +  T    +++   T  ++N  +E W   D LLLGWLYN MTP+VA QLMG+ +  DLW   Q  FGVQSRA
Subjt:  GEILCPQKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRA

Query:  EEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT----N
        EED+LRQ  Q +RKGNT M EYL +MK + DNL    SP+P RAL+SQVLLGLDE YN V+  IQ +P ISWLDMQS+LL +E+ L  QN QK      N
Subjt:  EEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT----N

Query:  SSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGGRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEFGA
         +  P++NMA  R   NGQR  ++ +  G  R  F+GQRG    G     PTCQ+CGK GH+A VCYNRFNKEF +
Subjt:  SSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGGRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEFGA

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]2.3e-4750.92Show/hide
Query:  TTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDN
        T +E + +  +   +NP YEAW V+D+LLLGWLYN M  +VA Q+MG+  S +LWT VQ LFGVQSRAE DYL+Q FQQ+ KG+  M EYL+LMK H+DN
Subjt:  TTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDN

Query:  LRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKI---TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTS
        L +A S +  R LVSQVL GLDE+YNP+V  +Q + ++SW +M +ELL+YE+RL +QN+ K     N +  PSVN   GR     QR    N ++G  T 
Subjt:  LRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKI---TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTS

Query:  FNG--QRGG---RGRGRG
          G  QRG    R RGRG
Subjt:  FNG--QRGG---RGRGRG

XP_038887140.1 uncharacterized protein LOC120077331 [Benincasa hispida]6.0e-4851.57Show/hide
Query:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR
        Q  +G+S    +T+    A   S++  +     +  T   +NP YEAW V+DQLLLGWLYN MTPEV  Q+MG   + DLWT +Q+LF +QSR EEDYLR
Subjt:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR

Query:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV
          FQ++RKGN  M +YLR MKM++DNL  A SP+P+R LVSQVLLGLDE+YN +VATIQ R  + WLDMQ ELL YE+RL  Q+ QK+T   N  +  S 
Subjt:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV

Query:  NMASGRGNNNGQRGQTSNQNNGG
        NM + R  N   +  +SNQ+ GG
Subjt:  NMASGRGNNNGQRGQTSNQNNGG

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]7.3e-6253.56Show/hide
Query:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR
        Q  IG+S    +T G  AA   S + ++     + +T   +NP YE+W  +DQLLLGWLYN MTPEVA Q+MG E + DLWT + +LFGVQSR EEDYLR
Subjt:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR

Query:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV
          FQ +RKGN  M EYL+ MKM++DNL  A SP+P R LVSQVLLGLDE+YN +VA IQ R  +SWLDMQSELL YE+RL  Q+ QK T   N  +  SV
Subjt:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV

Query:  NMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG-GRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEF
        NM + R  N   +  +SNQ+ GG     G  G GRGRGR   +P CQVCGK+GH A  C+NR++++F
Subjt:  NMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG-GRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEF

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]7.3e-6253.56Show/hide
Query:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR
        Q  IG+S    +T G  AA   S + ++     + +T   +NP YE+W  +DQLLLGWLYN MTPEVA Q+MG E + DLWT + +LFGVQSR EEDYLR
Subjt:  QKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLR

Query:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV
          FQ +RKGN  M EYL+ MKM++DNL  A SP+P R LVSQVLLGLDE+YN +VA IQ R  +SWLDMQSELL YE+RL  Q+ QK T   N  +  SV
Subjt:  QTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT---NSSNGPSV

Query:  NMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG-GRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEF
        NM + R  N   +  +SNQ+ GG     G  G GRGRGR   +P CQVCGK+GH A  C+NR++++F
Subjt:  NMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG-GRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEF

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein1.7e-4356.77Show/hide
Query:  LYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATI
        LYN +TPEV  QL+G+ ++ D+W      FGV+SRAEED+LRQTFQ +RKGN+ M +YLR+MK ++DNL  A SPIP RAL+SQVLLGLDE YNPV+  I
Subjt:  LYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATI

Query:  QARPSISWLDMQSELLSYEQRLNFQNAQK-ITNSSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGG----RGRGRGR-YRPTCQ
        Q +P ISWLDMQS+LL +E+RL  QN+QK I N     ++NMA  R NNN  RG  ++Q +G  R +F G RGG    RG GRGR  + TCQ
Subjt:  QARPSISWLDMQSELLSYEQRLNFQNAQK-ITNSSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGG----RGRGRGR-YRPTCQ

A0A5A7SIT7 Uncharacterized protein1.8e-5850.72Show/hide
Query:  GEILCPQKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRA
        GE  CP  F+  ++++N    TT  EE +  T    +++   T  ++N  +E W   D LLLGWLYN MTP+VA QLMG+ +  DLW   Q  FGVQSRA
Subjt:  GEILCPQKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRA

Query:  EEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT----N
        EED+LRQ  Q +RKGNT M EYL +MK + DNL    SP+P RAL+SQVLLGLDE YN V+  IQ +P ISWLDMQS+LL +E+ L  QN QK      N
Subjt:  EEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKIT----N

Query:  SSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGGRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEFGA
         +  P++NMA  R   NGQR  ++ +  G  R  F+GQRG    G     PTCQ+CGK GH+A VCYNRFNKEF +
Subjt:  SSNGPSVNMASGRGNNNGQRGQTSNQNNG-GRTSFNGQRGGRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEFGA

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-4754.46Show/hide
Query:  VATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISW
        +A QLMG+ ++ DLW   Q LFGVQSRAEED+LRQ FQ +RK   +  +YLR+MK +SD L  A SP+P+RA +SQ LLGLDE YNPV+A IQ +P ISW
Subjt:  VATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISW

Query:  LDMQSELLSYEQRLNFQNAQKITNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG----GRGRGRGR-YRPTCQVCGKIGHTADVCYNRFNK
        +DMQSELL++E+RL  Q+ QK T +     VN+A  R +++ ++      +   R +  GQRG    GRGRG+GR  +PTCQVC K GH+A VCYNRFNK
Subjt:  LDMQSELLSYEQRLNFQNAQKITNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTSFNGQRG----GRGRGRGR-YRPTCQVCGKIGHTADVCYNRFNK

Query:  EF
        EF
Subjt:  EF

A0A6J1D5J0 uncharacterized protein LOC1110175014.2e-4757.46Show/hide
Query:  EYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLM
        E S    +  ++ +  T + INP YE+W   DQLLLGWLYN MTPEVATQ+MGYE++ DLW  +Q LFGVQS+AEEDYLRQ FQQ+RKG+  M ++LR+M
Subjt:  EYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLM

Query:  KMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSY---EQRLNFQNAQKITNSSNGPSVN
        K H+DNL  A SP+P R+L+SQVLLGLDE+YNPVVATIQ +  ISW +MQ+E  S     QR N QN+Q   N++ G   N
Subjt:  KMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSY---EQRLNFQNAQKITNSSNGPSVN

A0A6J1DCW4 uncharacterized protein LOC1110195981.1e-4750.92Show/hide
Query:  TTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDN
        T +E + +  +   +NP YEAW V+D+LLLGWLYN M  +VA Q+MG+  S +LWT VQ LFGVQSRAE DYL+Q FQQ+ KG+  M EYL+LMK H+DN
Subjt:  TTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDN

Query:  LRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKI---TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTS
        L +A S +  R LVSQVL GLDE+YNP+V  +Q + ++SW +M +ELL+YE+RL +QN+ K     N +  PSVN   GR     QR    N ++G  T 
Subjt:  LRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKI---TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTS

Query:  FNG--QRGG---RGRGRG
          G  QRG    R RGRG
Subjt:  FNG--QRGG---RGRGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)4.4e-0426.15Show/hide
Query:  WFVIDQLLLGWLYNLMTPEVATQLMGYE-HSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLG
        W   D L+  W+Y  +T  +   ++     + DLW  ++ LF     A         + +   + ++ EY + +K  SD L    SPI +R LV  +L G
Subjt:  WFVIDQLLLGWLYNLMTPEVATQLMGYE-HSLDLWTIVQRLFGVQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLG

Query:  LDEDYNPVVATIQAR-PSISWLDMQSELLSYEQRLNFQNAQKI--TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTSFNGQRGGRGRGRGRY
        L E Y+ ++  I+ + P  S+ + +S LL  E RL+ ++   +  TN  +  +V     R      +   +N +N GR     +  G G   GRY
Subjt:  LDEDYNPVVATIQAR-PSISWLDMQSELLSYEQRLNFQNAQKI--TNSSNGPSVNMASGRGNNNGQRGQTSNQNNGGRTSFNGQRGGRGRGRGRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAAACTTCAACACACCTCCCTGAATCAACTTTTGAACCAGGAGAAATTCTATGTCCTCAGAAATTTATAGGACAGAGCACAAACGCCAACACCACTAAAGGAAC
CACCGCTGCTGAAGAGTATAGTTCTCAAACCACCACAGTCGAAAATAATGTGAATCAAATGACAGGTAGCGTGATTAATCCAGCTTATGAGGCATGGTTTGTAATTGATC
AACTTCTTTTGGGATGGCTCTACAATTTGATGACACCAGAAGTTGCAACACAGTTGATGGGCTATGAACACTCCCTTGATCTATGGACTATCGTACAAAGATTGTTCGGA
GTCCAATCCAGAGCTGAGGAAGATTATCTCCGTCAAACATTTCAACAATCGCGGAAAGGTAACACTACCATGTTTGAATACTTAAGACTAATGAAAATGCATTCTGATAA
CCTAAGGATGGCTAGAAGTCCTATCCCAGAAAGAGCACTTGTCTCTCAAGTTTTATTAGGACTTGATGAAGACTATAACCCAGTGGTGGCTACCATTCAAGCAAGACCAT
CCATCTCTTGGCTGGATATGCAGTCTGAACTTCTCTCCTACGAACAAAGACTAAACTTTCAGAATGCTCAGAAAATCACAAACTCAAGCAATGGACCATCAGTAAATATG
GCTAGTGGAAGAGGAAACAATAATGGACAAAGAGGTCAAACTTCAAATCAAAACAATGGTGGAAGAACGTCATTCAATGGACAACGAGGAGGCAGAGGTCGTGGGAGAGG
ACGTTATCGTCCAACTTGCCAAGTATGTGGAAAAATTGGGCACACTGCGGACGTGTGCTACAACAGGTTCAACAAAGAGTTTGGTGCCCTAAATACTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAAACTTCAACACACCTCCCTGAATCAACTTTTGAACCAGGAGAAATTCTATGTCCTCAGAAATTTATAGGACAGAGCACAAACGCCAACACCACTAAAGGAAC
CACCGCTGCTGAAGAGTATAGTTCTCAAACCACCACAGTCGAAAATAATGTGAATCAAATGACAGGTAGCGTGATTAATCCAGCTTATGAGGCATGGTTTGTAATTGATC
AACTTCTTTTGGGATGGCTCTACAATTTGATGACACCAGAAGTTGCAACACAGTTGATGGGCTATGAACACTCCCTTGATCTATGGACTATCGTACAAAGATTGTTCGGA
GTCCAATCCAGAGCTGAGGAAGATTATCTCCGTCAAACATTTCAACAATCGCGGAAAGGTAACACTACCATGTTTGAATACTTAAGACTAATGAAAATGCATTCTGATAA
CCTAAGGATGGCTAGAAGTCCTATCCCAGAAAGAGCACTTGTCTCTCAAGTTTTATTAGGACTTGATGAAGACTATAACCCAGTGGTGGCTACCATTCAAGCAAGACCAT
CCATCTCTTGGCTGGATATGCAGTCTGAACTTCTCTCCTACGAACAAAGACTAAACTTTCAGAATGCTCAGAAAATCACAAACTCAAGCAATGGACCATCAGTAAATATG
GCTAGTGGAAGAGGAAACAATAATGGACAAAGAGGTCAAACTTCAAATCAAAACAATGGTGGAAGAACGTCATTCAATGGACAACGAGGAGGCAGAGGTCGTGGGAGAGG
ACGTTATCGTCCAACTTGCCAAGTATGTGGAAAAATTGGGCACACTGCGGACGTGTGCTACAACAGGTTCAACAAAGAGTTTGGTGCCCTAAATACTCAATAG
Protein sequenceShow/hide protein sequence
MLQTSTHLPESTFEPGEILCPQKFIGQSTNANTTKGTTAAEEYSSQTTTVENNVNQMTGSVINPAYEAWFVIDQLLLGWLYNLMTPEVATQLMGYEHSLDLWTIVQRLFG
VQSRAEEDYLRQTFQQSRKGNTTMFEYLRLMKMHSDNLRMARSPIPERALVSQVLLGLDEDYNPVVATIQARPSISWLDMQSELLSYEQRLNFQNAQKITNSSNGPSVNM
ASGRGNNNGQRGQTSNQNNGGRTSFNGQRGGRGRGRGRYRPTCQVCGKIGHTADVCYNRFNKEFGALNTQ