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PI0005333 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005333
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:3287829..3288715
RNA-Seq ExpressionPI0005333
SyntenyPI0005333
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052224.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.1e-2062.37Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        + +A+YNV VL+IANE F +G+KI E KLVRKVLRSL   FD KVTTIEEA+DI TLKLDELF SL  FE+   ++ DKKGK + F S+ +EE
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

KAA0054430.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.2e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TVA YN  V++IANE F +G++I+E K+VRKVLRSL   FD KV  I+E +DI TLKLDELFESL  FE+T  ++ DKKGKG+AF S+ +EE
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

KAA0054892.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.2e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        ++V+KYN  VL+IAN+L  +G+KI+E K++RKVLRSL R  D KVT IEEA DI TLKL+ELFESL  FE+   D+  KKGKG+AF S  D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

KAA0056418.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.9e-2061.29Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TV++YN  VL IAN+    G+KI E K+V KVLRSL R FD KVT IEEA DI TLKLDELFESL MFE+   D+  KKGKG+ F S+ D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

KAA0062782.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.2e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TV++YN  VL+I N+   +G+KI+E K+VRKVLRSL R FD KVTTIEEA DI TLKLDELF SL  FE+   D+  KKGKG+ F S+ D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

TrEMBL top hitse value%identityAlignment
A0A5A7UA40 Gag-pol polyprotein5.4e-2162.37Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        + +A+YNV VL+IANE F +G+KI E KLVRKVLRSL   FD KVTTIEEA+DI TLKLDELF SL  FE+   ++ DKKGK + F S+ +EE
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

A0A5A7V3G8 Gag-pol polyprotein1.6e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TV++YN  VL+I N+   +G+KI+E K+VRKVLRSL R FD KVTTIEEA DI TLKLDELF SL  FE+   D+  KKGKG+ F S+ D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

A0A5D3CLA2 Receptor-like protein 121.6e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        ++V+KYN  VL+IAN+L  +G+KI+E K++RKVLRSL R  D KVT IEEA DI TLKL+ELFESL  FE+   D+  KKGKG+AF S  D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

A0A5D3CW16 Gag-proteinase polyprotein1.6e-2060.22Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TVA YN  V++IANE F +G++I+E K+VRKVLRSL   FD KV  I+E +DI TLKLDELFESL  FE+T  ++ DKKGKG+AF S+ +EE
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

A0A5D3DZQ7 Gag-pol polyprotein9.1e-2161.29Show/hide
Query:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE
        +TV++YN  VL IAN+    G+KI E K+V KVLRSL R FD KVT IEEA DI TLKLDELFESL MFE+   D+  KKGKG+ F S+ D+E
Subjt:  QTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDELFESLRMFELTFDDKSDKKGKGLAFHSMSDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGTGGCGCGACAGATGGCTTGAAGCGGGCACAAAATGGATCAAACGGACTGGGTCGAAGCAGGACGGGTTGTGCAATCATGAAGCGATGTGTGTTGGGTCGCGA
ATCGGGTCGAAGCGGATGCGTGCAAGGACTGGTGACACAGACTGTTGCAAAGTATAATGTACATGTATTGGATATTGCTAATGAGTTGTTTGCTATGGGTCAAAAGATTG
TAGAGCCAAAGCTGGTTAGGAAGGTATTACGATCATTGCGAAGACATTTTGACAAGAAAGTTACTACAATTGAGGAAGCAAATGACATTGCTACCTTAAAATTGGATGAG
TTGTTTGAGTCTCTACGTATGTTTGAACTAACGTTTGATGATAAGAGTGACAAGAAAGGTAAAGGGTTGGCTTTCCACTCTATGAGTGATGAAGAACCTCATGAGACGGA
AAAGCTAGGCATCAATACCCTATCCTGTGAACGAGACGAACTACTAGGCATAGATACCCTATCTCATGATGTGATACTTACGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGTGGCGCGACAGATGGCTTGAAGCGGGCACAAAATGGATCAAACGGACTGGGTCGAAGCAGGACGGGTTGTGCAATCATGAAGCGATGTGTGTTGGGTCGCGA
ATCGGGTCGAAGCGGATGCGTGCAAGGACTGGTGACACAGACTGTTGCAAAGTATAATGTACATGTATTGGATATTGCTAATGAGTTGTTTGCTATGGGTCAAAAGATTG
TAGAGCCAAAGCTGGTTAGGAAGGTATTACGATCATTGCGAAGACATTTTGACAAGAAAGTTACTACAATTGAGGAAGCAAATGACATTGCTACCTTAAAATTGGATGAG
TTGTTTGAGTCTCTACGTATGTTTGAACTAACGTTTGATGATAAGAGTGACAAGAAAGGTAAAGGGTTGGCTTTCCACTCTATGAGTGATGAAGAACCTCATGAGACGGA
AAAGCTAGGCATCAATACCCTATCCTGTGAACGAGACGAACTACTAGGCATAGATACCCTATCTCATGATGTGATACTTACGAGATGA
Protein sequenceShow/hide protein sequence
MMRGATDGLKRAQNGSNGLGRSRTGCAIMKRCVLGRESGRSGCVQGLVTQTVAKYNVHVLDIANELFAMGQKIVEPKLVRKVLRSLRRHFDKKVTTIEEANDIATLKLDE
LFESLRMFELTFDDKSDKKGKGLAFHSMSDEEPHETEKLGINTLSCERDELLGIDTLSHDVILTR