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PI0005376 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005376
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:16885219..16885617
RNA-Seq ExpressionPI0005376
SyntenyPI0005376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]1.9e-2547.58Show/hide
Query:  NNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISP
        N  + N     +A E N   +AH+ + PI  Y SP+LY F+LGI YP FG N RF++KP M+ MIQ   QFGG+L EDP  HI+S Y +C+SFH+P +S 
Subjt:  NNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISP

Query:  EELHFALFPLTLRDEAKRWANSLK
        E+LH   F  TL+D+ K+W  +L+
Subjt:  EELHFALFPLTLRDEAKRWANSLK

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]4.3e-2563.92Show/hide
Query:  NNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGIS
        NNQN    Q  QEQN AY+AH  D+PI SY SPNLY+F+ GIAY  FGENV FEIK +M+ M QNA QFGGH  EDP+ HI++FY ICASF+M  IS
Subjt:  NNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.3e-2962.5Show/hide
Query:  MANNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI
        M N NNQ +   Q AQ  N  Y+A   DRPI SY SPNLY+F+ GIAYP F EN RFEIK VM+Q+IQNA QF  H  +DPH +I++FYSICASFHMPGI
Subjt:  MANNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI

Query:  SPEELHFALFPL
        S EEL F  F L
Subjt:  SPEELHFALFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.2e-2850.4Show/hide
Query:  QNLHPQQVAQ-EQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISPEEL
        QN + Q+ A  + N   +AH  +RP+  Y SPNLYNF+ GI  P F  N RFE+KPVM+QM+Q A QFGG  GEDPH H++SF  IC++F M G+  + +
Subjt:  QNLHPQQVAQ-EQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISPEEL

Query:  HFALFPLTLRDEAKRWANSLKDGEV
           LFP +LRDEA++WA S + GE+
Subjt:  HFALFPLTLRDEAKRWANSLKDGEV

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]5.0e-2648.46Show/hide
Query:  NNNNQNLHPQQVAQE--QNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI
        NNNN+     Q      Q+  ++A   + PI +Y +PNLY+FS GI+ P+  EN RFEIKPVM+QMIQN RQF     E+PH H+  F  +C++F +PGI
Subjt:  NNNNQNLHPQQVAQE--QNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI

Query:  SPEELHFALFPLTLRDEAKRWANSLKDGEV
        +P  +   LFP TLRD+AKRWA+SL+  E+
Subjt:  SPEELHFALFPLTLRDEAKRWANSLKDGEV

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein9.3e-2647.58Show/hide
Query:  NNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISP
        N  + N     +A E N   +AH+ + PI  Y SP+LY F+LGI YP FG N RF++KP M+ MIQ   QFGG+L EDP  HI+S Y +C+SFH+P +S 
Subjt:  NNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISP

Query:  EELHFALFPLTLRDEAKRWANSLK
        E+LH   F  TL+D+ K+W  +L+
Subjt:  EELHFALFPLTLRDEAKRWANSLK

A0A5A7UDN8 Uncharacterized protein2.1e-2563.92Show/hide
Query:  NNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGIS
        NNQN    Q  QEQN AY+AH  D+PI SY SPNLY+F+ GIAY  FGENV FEIK +M+ M QNA QFGGH  EDP+ HI++FY ICASF+M  IS
Subjt:  NNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 16.2e-3062.5Show/hide
Query:  MANNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI
        M N NNQ +   Q AQ  N  Y+A   DRPI SY SPNLY+F+ GIAYP F EN RFEIK VM+Q+IQNA QF  H  +DPH +I++FYSICASFHMPGI
Subjt:  MANNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGI

Query:  SPEELHFALFPL
        S EEL F  F L
Subjt:  SPEELHFALFPL

A0A5D3BCV5 Uncharacterized protein8.4e-1972.31Show/hide
Query:  MIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISPEELHFALFPLTLRDEAKRWANSLKDGEV
        MIQN RQF  H G+DPHK+I SFYSI  SFHMPGI  +EL FALFP T+ DEAKRWANSLK G+V
Subjt:  MIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISPEELHFALFPLTLRDEAKRWANSLKDGEV

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.3e-2459.8Show/hide
Query:  MANNNNQNLHPQQVAQEQ-NAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPG
        MA+N N  +      Q Q N   +AH+ D PI +Y S NLY+F+LGIAY VFGEN  FE+KPVM+QMIQ A QF G+ GEDPH+HI+SFYSICASFHM  
Subjt:  MANNNNQNLHPQQVAQEQ-NAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACAATAACAACCAAAATTTGCATCCCCAGCAAGTTGCCCAAGAACAGAACGCCGCCTACATGGCCCACCATTTTGACAGACCAATTATGTCATATGTTTCGCC
AAATCTCTATAACTTCAGCCTAGGAATCGCCTACCCTGTGTTCGGTGAGAATGTAAGATTCGAGATAAAGCCTGTTATGATACAGATGATACAGAACGCTAGACAATTTG
GCGGTCACCTTGGCGAAGATCCACACAAGCACATTCAGAGCTTCTATTCCATTTGTGCCTCCTTTCACATGCCTGGTATATCACCTGAAGAGTTGCATTTTGCTCTTTTC
CCGCTAACATTGAGGGATGAAGCAAAGAGATGGGCAAACTCTCTAAAAGATGGGGAGGTTGGAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACAATAACAACCAAAATTTGCATCCCCAGCAAGTTGCCCAAGAACAGAACGCCGCCTACATGGCCCACCATTTTGACAGACCAATTATGTCATATGTTTCGCC
AAATCTCTATAACTTCAGCCTAGGAATCGCCTACCCTGTGTTCGGTGAGAATGTAAGATTCGAGATAAAGCCTGTTATGATACAGATGATACAGAACGCTAGACAATTTG
GCGGTCACCTTGGCGAAGATCCACACAAGCACATTCAGAGCTTCTATTCCATTTGTGCCTCCTTTCACATGCCTGGTATATCACCTGAAGAGTTGCATTTTGCTCTTTTC
CCGCTAACATTGAGGGATGAAGCAAAGAGATGGGCAAACTCTCTAAAAGATGGGGAGGTTGGAATATAG
Protein sequenceShow/hide protein sequence
MANNNNQNLHPQQVAQEQNAAYMAHHFDRPIMSYVSPNLYNFSLGIAYPVFGENVRFEIKPVMIQMIQNARQFGGHLGEDPHKHIQSFYSICASFHMPGISPEELHFALF
PLTLRDEAKRWANSLKDGEVGI