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PI0005381 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005381
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:25147692..25148464
RNA-Seq ExpressionPI0005381
SyntenyPI0005381
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-2755.47Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK D+ARPISTILDG+NYITW      F    K+     WR             ++ D TK          + ET+ EDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFDAFD+AKELWDF++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.9e-3056.25Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK  +ARPISTILDG+NYITW      F    K+         +  +     KN S + T++ DA+ SD+ + E TVEDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFD FD+AKELW+F++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

XP_008445037.1 PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo]1.8e-2755.47Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK D+ARPISTILDG+NYITW      F    K+     WR             ++ D TK          + ET+ EDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFDAFD+AKELWDF++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

XP_016901896.1 PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo]8.5e-3061.07Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDT-TKNAD--ADLSDVTIQETTVEDIKYIEKLEDCDSKNHQI
        M+K ++AR ISTILDG+NYITW  L   F    K+     WR      T    K I P T  KN D  A+ SDV I ETT EDIKYIE+LED DSKNHQI
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDT-TKNAD--ADLSDVTIQETTVEDIKYIEKLEDCDSKNHQI

Query:  ITWLGNTSIPTIHTQFDAFDTAKELWDFVHT
        ITWLGNTSIP IHTQ D+FDTAKELWDF+ T
Subjt:  ITWLGNTSIPTIHTQFDAFDTAKELWDFVHT

XP_031739694.1 uncharacterized protein LOC105434738 [Cucumis sativus]3.7e-3362.12Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISP----DTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQ
        MEK ++ARPISTILDG+NYITW      F    K+     WR      T    K + P    DTT+N D D SDVT+QETT E  KYIE+LED DSKNHQ
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISP----DTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQ

Query:  IITWLGNTSIPTIHTQFDAFDTAKELWDFVHT
        IITWLGNTSIP IHTQFDAFDTAKELWDF+ T
Subjt:  IITWLGNTSIPTIHTQFDAFDTAKELWDFVHT

TrEMBL top hitse value%identityAlignment
A0A1S3BBA1 uncharacterized protein LOC1034882008.5e-2855.47Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK D+ARPISTILDG+NYITW      F    K+     WR             ++ D TK          + ET+ EDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFDAFD+AKELWDF++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

A0A1S4E0Y9 uncharacterized protein LOC1079914634.1e-3061.07Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDT-TKNAD--ADLSDVTIQETTVEDIKYIEKLEDCDSKNHQI
        M+K ++AR ISTILDG+NYITW  L   F    K+     WR      T    K I P T  KN D  A+ SDV I ETT EDIKYIE+LED DSKNHQI
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDT-TKNAD--ADLSDVTIQETTVEDIKYIEKLEDCDSKNHQI

Query:  ITWLGNTSIPTIHTQFDAFDTAKELWDFVHT
        ITWLGNTSIP IHTQ D+FDTAKELWDF+ T
Subjt:  ITWLGNTSIPTIHTQFDAFDTAKELWDFVHT

A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-948.5e-2855.47Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK D+ARPISTILDG+NYITW      F    K+     WR             ++ D TK          + ET+ EDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFDAFD+AKELWDF++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

A0A5A7TXR0 Putative mitochondrial protein1.4e-3056.25Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK  +ARPISTILDG+NYITW      F    K+         +  +     KN S + T++ DA+ SD+ + E TVEDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFD FD+AKELW+F++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-948.5e-2855.47Show/hide
Query:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW
        MEK D+ARPISTILDG+NYITW      F    K+     WR             ++ D TK          + ET+ EDI+YIE+LED DSKNHQIITW
Subjt:  MEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQTYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITW

Query:  LGNTSIPTIHTQFDAFDTAKELWDFVHT
        LGNTSIP IHTQFDAFD+AKELWDF++T
Subjt:  LGNTSIPTIHTQFDAFDTAKELWDFVHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTCAAACGCCGAAACCCACTTTTGTCGCTCACTTTTGTCGCTCGTCGCAAGTCTCCAGTAACCCATCGTTTCAGATCCCATTCCGTCACTCAATTATCCCGAAA
CCCACCTCCGTTCCAAATCTGTTCCATCGACACTCATTCTTTCGACGTCGCGAAACGCAAATCTGACTCCAGTTGTATGGAGAAAACCGACATTGCTCGTCCTATTAGCA
CCATCCTTGATGGCTCAAATTACATCACATGGGGCTCACTAAATGAGGAGTTTTTTTATCAGTCGAAAATTATGGTGTATAGTTATTGGAGATATCACCAAACCTGTCAA
ACCTACTCCTCCGGGAAAAACATCAGTCCAGACACCACTAAGAATGCTGATGCAGACCTCTCTGATGTCACCATTCAAGAGACTACTGTAGAAGACATCAAGTACATTGA
AAAACTTGAGGACTGTGATAGCAAAAATCATCAAATCATCACTTGGTTGGGTAACACTTCTATTCCGACTATTCATACTCAATTTGATGCATTTGATACTGCAAAAGAAC
TTTGGGATTTTGTCCACACGTTTTCAGTCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTCAAACGCCGAAACCCACTTTTGTCGCTCACTTTTGTCGCTCGTCGCAAGTCTCCAGTAACCCATCGTTTCAGATCCCATTCCGTCACTCAATTATCCCGAAA
CCCACCTCCGTTCCAAATCTGTTCCATCGACACTCATTCTTTCGACGTCGCGAAACGCAAATCTGACTCCAGTTGTATGGAGAAAACCGACATTGCTCGTCCTATTAGCA
CCATCCTTGATGGCTCAAATTACATCACATGGGGCTCACTAAATGAGGAGTTTTTTTATCAGTCGAAAATTATGGTGTATAGTTATTGGAGATATCACCAAACCTGTCAA
ACCTACTCCTCCGGGAAAAACATCAGTCCAGACACCACTAAGAATGCTGATGCAGACCTCTCTGATGTCACCATTCAAGAGACTACTGTAGAAGACATCAAGTACATTGA
AAAACTTGAGGACTGTGATAGCAAAAATCATCAAATCATCACTTGGTTGGGTAACACTTCTATTCCGACTATTCATACTCAATTTGATGCATTTGATACTGCAAAAGAAC
TTTGGGATTTTGTCCACACGTTTTCAGTCTATTAG
Protein sequenceShow/hide protein sequence
MDLKRRNPLLSLTFVARRKSPVTHRFRSHSVTQLSRNPPPFQICSIDTHSFDVAKRKSDSSCMEKTDIARPISTILDGSNYITWGSLNEEFFYQSKIMVYSYWRYHQTCQ
TYSSGKNISPDTTKNADADLSDVTIQETTVEDIKYIEKLEDCDSKNHQIITWLGNTSIPTIHTQFDAFDTAKELWDFVHTFSVY