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PI0005385 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005385
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr11:13782487..13783418
RNA-Seq ExpressionPI0005385
SyntenyPI0005385
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]1.5e-1342.02Show/hide
Query:  DDFMQDLCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGL
        D     +C+    IED ++  ED +LVP GS  + VLE+ +DD L KGK I  + A ET   SPPK+T  Q D     ++ ++++KFI    GKPM DG 
Subjt:  DDFMQDLCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGL

Query:  EDIFQNQVDLQECVMRHEK
        ED+FQ Q + QE  +R +K
Subjt:  EDIFQNQVDLQECVMRHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]2.3e-1135.81Show/hide
Query:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY
        Q ++ + D +QD LC++   I D  +E E+ TL      ++ +LE+ IDD L K K++  E+A +TR  SPPKQ+      D +Q + +R+++++D  ++
Subjt:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY

Query:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI
        KFINE + +P+  G ED+FQ Q +LQE  ++++K L+  E +P  + I
Subjt:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]2.9e-1445.13Show/hide
Query:  LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGLEDIFQN
        +C+    IED ++  ED +LVP GS  + VLE+ +DD L KGK I  + A ET   SPPK+T  Q D     +E ++++KFI    GKPM DG ED+FQ 
Subjt:  LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGLEDIFQN

Query:  QVDLQECVMRHEK
        Q + QE  +R EK
Subjt:  QVDLQECVMRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]8.2e-1756.38Show/hide
Query:  EDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENED-FYKFINETIGKPMIDGLEDIFQNQVDLQECV
        E+ATL   G   + V EEP+DD L KGK+IA+E+ GE    SP KQT++QQD+  RE+++ED ++KFI++T GKPM+D LEDIFQ Q DLQEC+
Subjt:  EDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENED-FYKFINETIGKPMIDGLEDIFQNQVDLQECV

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]2.3e-1135.81Show/hide
Query:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY
        Q ++ + D +QD LC++   I D  +E E+ TL      ++ +LE+ IDD L K K++  E+A +TR  SPPKQ+      D +Q + +R+++++D  ++
Subjt:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY

Query:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI
        KFINE + +P+  G ED+FQ Q +LQE  ++++K L+  E +P  + I
Subjt:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein7.0e-1442.02Show/hide
Query:  DDFMQDLCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGL
        D     +C+    IED ++  ED +LVP GS  + VLE+ +DD L KGK I  + A ET   SPPK+T  Q D     ++ ++++KFI    GKPM DG 
Subjt:  DDFMQDLCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGL

Query:  EDIFQNQVDLQECVMRHEK
        ED+FQ Q + QE  +R +K
Subjt:  EDIFQNQVDLQECVMRHEK

A0A5A7TJU0 Uncharacterized protein1.1e-1135.81Show/hide
Query:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY
        Q ++ + D +QD LC++   I D  +E E+ TL      ++ +LE+ IDD L K K++  E+A +TR  SPPKQ+      D +Q + +R+++++D  ++
Subjt:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY

Query:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI
        KFINE + +P+  G ED+FQ Q +LQE  ++++K L+  E +P  + I
Subjt:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI

A0A5D3D8Q5 Uncharacterized protein1.4e-1445.13Show/hide
Query:  LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGLEDIFQN
        +C+    IED ++  ED +LVP GS  + VLE+ +DD L KGK I  + A ET   SPPK+T  Q D     +E ++++KFI    GKPM DG ED+FQ 
Subjt:  LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGLEDIFQN

Query:  QVDLQECVMRHEK
        Q + QE  +R EK
Subjt:  QVDLQECVMRHEK

A0A5D3DK59 Gag-pol4.0e-1756.38Show/hide
Query:  EDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENED-FYKFINETIGKPMIDGLEDIFQNQVDLQECV
        E+ATL   G   + V EEP+DD L KGK+IA+E+ GE    SP KQT++QQD+  RE+++ED ++KFI++T GKPM+D LEDIFQ Q DLQEC+
Subjt:  EDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQTDDQQDDVVRENENED-FYKFINETIGKPMIDGLEDIFQNQVDLQECV

A0A5D3E1H0 Uncharacterized protein1.1e-1135.81Show/hide
Query:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY
        Q ++ + D +QD LC++   I D  +E E+ TL      ++ +LE+ IDD L K K++  E+A +TR  SPPKQ+      D +Q + +R+++++D  ++
Subjt:  QLNQGIDDFMQD-LCNIDFDIED-LREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETRAHSPPKQT------DDQQDDVVRENENED--FY

Query:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI
        KFINE + +P+  G ED+FQ Q +LQE  ++++K L+  E +P  + I
Subjt:  KFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCCCTCCCCACCAAATCCAAATACTCACAATCACTACTACTCCCCTGTGGCAAGAGGAAAATCCTCAATCTCTTGTCACGCAAGCCCTTGACCAAACCACCTT
CTCGCCAAATATAGTTCCTGAATCCCAACTTAACCAAGGGATAGATGATTTCATGCAAGACCTCTGCAATATAGACTTTGACATTGAAGATTTAAGGGAGCCAGAGGACG
CGACCCTAGTTCCTGATGGGTCGCAACATGAAGGTGTCTTGGAGGAGCCCATTGATGACCTACTCCCCAAAGGTAAGGAAATCGCCTTTGAGGAAGCTGGTGAAACGCGA
GCTCATTCGCCACCTAAGCAAACAGATGATCAACAAGATGATGTGGTGAGAGAGAATGAAAATGAGGATTTTTACAAGTTCATCAATGAGACGATTGGAAAGCCAATGAT
AGATGGACTTGAAGACATCTTCCAAAACCAAGTCGATCTACAAGAATGCGTGATGAGACATGAGAAGTTTTTAAGACGAAAAGAGAAGCAACCACACGAAGAAAATATCA
GGCGAGGAACCATGCGTGCAACTAGGCGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCCCTCCCCACCAAATCCAAATACTCACAATCACTACTACTCCCCTGTGGCAAGAGGAAAATCCTCAATCTCTTGTCACGCAAGCCCTTGACCAAACCACCTT
CTCGCCAAATATAGTTCCTGAATCCCAACTTAACCAAGGGATAGATGATTTCATGCAAGACCTCTGCAATATAGACTTTGACATTGAAGATTTAAGGGAGCCAGAGGACG
CGACCCTAGTTCCTGATGGGTCGCAACATGAAGGTGTCTTGGAGGAGCCCATTGATGACCTACTCCCCAAAGGTAAGGAAATCGCCTTTGAGGAAGCTGGTGAAACGCGA
GCTCATTCGCCACCTAAGCAAACAGATGATCAACAAGATGATGTGGTGAGAGAGAATGAAAATGAGGATTTTTACAAGTTCATCAATGAGACGATTGGAAAGCCAATGAT
AGATGGACTTGAAGACATCTTCCAAAACCAAGTCGATCTACAAGAATGCGTGATGAGACATGAGAAGTTTTTAAGACGAAAAGAGAAGCAACCACACGAAGAAAATATCA
GGCGAGGAACCATGCGTGCAACTAGGCGAACTTGA
Protein sequenceShow/hide protein sequence
MPSPPHQIQILTITTTPLWQEENPQSLVTQALDQTTFSPNIVPESQLNQGIDDFMQDLCNIDFDIEDLREPEDATLVPDGSQHEGVLEEPIDDLLPKGKEIAFEEAGETR
AHSPPKQTDDQQDDVVRENENEDFYKFINETIGKPMIDGLEDIFQNQVDLQECVMRHEKFLRRKEKQPHEENIRRGTMRATRRT