; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005387 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005387
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:14348511..14350304
RNA-Seq ExpressionPI0005387
SyntenyPI0005387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.1e-4138.78Show/hide
Query:  AKMKALEPERNLEVIAEELEDELEAMSPLDQ---GPPPRKLREVAG----PFKGKKKIGRSGPEERPSGSEAITKTPSINSLIKVEKGLFPFNGPLPDFL
        A+ K    E+  +  ++E E ELE +SPL+       P+K R + G      + K K  +   E + S  E +     +     +EKG+FPF G LP FL
Subjt:  AKMKALEPERNLEVIAEELEDELEAMSPLDQ---GPPPRKLREVAG----PFKGKKKIGRSGPEERPSGSEAITKTPSINSLIKVEKGLFPFNGPLPDFL

Query:  YAPIQAFGWKQFFKGHTKLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGK
         +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK V+F  + +N LY L     T        P+    + ALE +AWPG+ W++TP  K
Subjt:  YAPIQAFGWKQFFKGHTKLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGK

Query:  YQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWM
        YQL+PH L   ASVWL FIKK + PTRHD+TI+LE  MLLYCIM +  +N+ ++I   I +W+
Subjt:  YQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]5.3e-3151.05Show/hide
Query:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML
        +  + V F  E IN LYDLPND      Q  +V      A++ +++I WP      TPT + QL+PHQLTIEA+VWLFFIKKKIFPT HDSTI  E +++
Subjt:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A P P+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.7e-3234.48Show/hide
Query:  EDELEAMSPLDQGPPPRKLREVAGPFKGKKKIGRSGPEERPSGSEAITKTPSINSL-----IKVEKGLFPFNGPLPDFLYAPIQAFGWKQFFKGHTKLRL
        E++   +SPL++    R+ R+     +G+  + R   E+     E+      + S        VEKG F F   L  FL  PI+A GW++F +G   +R 
Subjt:  EDELEAMSPLDQGPPPRKLREVAGPFKGKKKIGRSGPEERPSGSEAITKTPSINSL-----IKVEKGLFPFNGPLPDFLYAPIQAFGWKQFFKGHTKLRL

Query:  GVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKK
        GVV+ FY  K++ ++                    Y +  + +         P+    +EALE +AW    W+VT   KY+L+ H LT EASVWL FIKK
Subjt:  GVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKK

Query:  KIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        K+ PTRHD+TI+ E  MLLYCIM +  V++ ++I   I +W++ P+GA P P  IE LC++
Subjt:  KIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-4049.44Show/hide
Query:  KLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   FNVE IN LY+ PNDA+   Q  V   T+ +A+EAL+V+AWPG+  EV P   +YQLYPH LT +A+VW+
Subjt:  KLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTG-KYQLYPHQLTIEASVWL

Query:  FFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVKVVPFLCAINSIPIP
        FF K KIFPT +DSTI+++ +++LYCIM KK +NL ++I  +IL+WM  PK AMP PS +E LC+K +P L       IP
Subjt:  FFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVKVVPFLCAINSIPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]5.3e-3151.05Show/hide
Query:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML
        +  + V F  E IN LYDLPND      Q  +V      A++ +++I WP      TPT + QL+PHQLTIEA+VWLFFIKKKIFPT HDSTI  E +++
Subjt:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A P P+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like5.5e-4238.78Show/hide
Query:  AKMKALEPERNLEVIAEELEDELEAMSPLDQ---GPPPRKLREVAG----PFKGKKKIGRSGPEERPSGSEAITKTPSINSLIKVEKGLFPFNGPLPDFL
        A+ K    E+  +  ++E E ELE +SPL+       P+K R + G      + K K  +   E + S  E +     +     +EKG+FPF G LP FL
Subjt:  AKMKALEPERNLEVIAEELEDELEAMSPLDQ---GPPPRKLREVAG----PFKGKKKIGRSGPEERPSGSEAITKTPSINSLIKVEKGLFPFNGPLPDFL

Query:  YAPIQAFGWKQFFKGHTKLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGK
         +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK V+F  + +N LY L     T        P+    + ALE +AWPG+ W++TP  K
Subjt:  YAPIQAFGWKQFFKGHTKLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGK

Query:  YQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWM
        YQL+PH L   ASVWL FIKK + PTRHD+TI+LE  MLLYCIM +  +N+ ++I   I +W+
Subjt:  YQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWM

A0A5A7U806 Transposase2.6e-3151.05Show/hide
Query:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML
        +  + V F  E IN LYDLPND      Q  +V      A++ +++I WP      TPT + QL+PHQLTIEA+VWLFFIKKKIFPT HDSTI  E +++
Subjt:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A P P+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

A0A5A7V6M5 Gag/pol protein8.0e-4149.44Show/hide
Query:  KLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   FNVE IN LY+ PNDA+   Q  V   T+ +A+EAL+V+AWPG+  EV P   +YQLYPH LT +A+VW+
Subjt:  KLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTG-KYQLYPHQLTIEASVWL

Query:  FFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVKVVPFLCAINSIPIP
        FF K KIFPT +DSTI+++ +++LYCIM KK +NL ++I  +IL+WM  PK AMP PS +E LC+K +P L       IP
Subjt:  FFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVKVVPFLCAINSIPIP

A0A5D3CVL7 Uncharacterized protein2.6e-3151.05Show/hide
Query:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML
        +  + V F  E IN LYDLPND      Q  +V      A++ +++I WP      TPT + QL+PHQLTIEA+VWLFFIKKKIFPT HDSTI  E +++
Subjt:  ISGKTVSFNVEAINALYDLPND-AKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKKKIFPTRHDSTINLESSML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A P P+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

A0A5D3DVQ6 Uncharacterized protein8.0e-3334.48Show/hide
Query:  EDELEAMSPLDQGPPPRKLREVAGPFKGKKKIGRSGPEERPSGSEAITKTPSINSL-----IKVEKGLFPFNGPLPDFLYAPIQAFGWKQFFKGHTKLRL
        E++   +SPL++    R+ R+     +G+  + R   E+     E+      + S        VEKG F F   L  FL  PI+A GW++F +G   +R 
Subjt:  EDELEAMSPLDQGPPPRKLREVAGPFKGKKKIGRSGPEERPSGSEAITKTPSINSL-----IKVEKGLFPFNGPLPDFLYAPIQAFGWKQFFKGHTKLRL

Query:  GVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKK
        GVV+ FY  K++ ++                    Y +  + +         P+    +EALE +AW    W+VT   KY+L+ H LT EASVWL FIKK
Subjt:  GVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASVWLFFIKK

Query:  KIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK
        K+ PTRHD+TI+ E  MLLYCIM +  V++ ++I   I +W++ P+GA P P  IE LC++
Subjt:  KIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCAGACCTGAACGAGCAAGTGGCGGAGCTACCCGCGAAGATGAAAGCATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTTGAGGACGAGCTGGA
GGCGATGAGCCCACTTGATCAAGGGCCACCGCCTAGAAAACTAAGAGAGGTCGCCGGACCATTCAAAGGAAAGAAAAAGATTGGGCGTTCTGGACCTGAAGAGCGCCCAT
CAGGCAGCGAAGCCATTACAAAAACACCCTCCATCAACTCCCTCATCAAAGTGGAGAAAGGGTTGTTTCCTTTTAATGGCCCACTCCCAGACTTCCTCTACGCGCCTATC
CAGGCGTTCGGGTGGAAGCAATTTTTCAAAGGGCACACTAAGTTAAGATTGGGGGTAGTGGAAAAGTTCTATACGGCTAAACTCAATGCTGACGAGTTTAGTGTGGAAAT
CAGTGGCAAAACAGTGAGCTTCAACGTGGAGGCCATCAACGCATTATATGATCTGCCCAACGATGCTAAAACGTCTAGGCAAATATACGTGGTTAGCCCCACAAGAAGAA
TGGCTCGTGAAGCGTTGGAAGTAATCGCATGGCCTGGGGTCGCATGGGAAGTAACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCATAGAGGCGAGCGTG
TGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACTTAGAGTCATCAATGTTACTCTATTGTATAATGACGAAGAAGCGCGTCAACCT
TGGCGATCTGATAGCTACATCCATTTTGTCCTGGATGCGAGCTCCTAAGGGCGCCATGCCCCTCCCATCTACCATTGAAGCCCTCTGCGTTAAGGTCGTACCATTCCTCT
GCGCCATAAATTCAATCCCAATCCCAGGCGAAGATGACGCCAACCCAGATATCAGGGTCTCACTGCCACCACCACCGCCTGCTGTGGATACAGGCAAAAATGTTGATGAC
CCACACATTAAGGACAAAACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCAATGCCCAACCTACTACCGCGCCAGGAGAAGATGAAGATTT
GGGCGATCTATTAGGGTCCCTTGTGTGTAAGCCAATGTTTGATCATTTTGATCAAGTATTGGCTCACCAAGCTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCAGACCTGAACGAGCAAGTGGCGGAGCTACCCGCGAAGATGAAAGCATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTTGAGGACGAGCTGGA
GGCGATGAGCCCACTTGATCAAGGGCCACCGCCTAGAAAACTAAGAGAGGTCGCCGGACCATTCAAAGGAAAGAAAAAGATTGGGCGTTCTGGACCTGAAGAGCGCCCAT
CAGGCAGCGAAGCCATTACAAAAACACCCTCCATCAACTCCCTCATCAAAGTGGAGAAAGGGTTGTTTCCTTTTAATGGCCCACTCCCAGACTTCCTCTACGCGCCTATC
CAGGCGTTCGGGTGGAAGCAATTTTTCAAAGGGCACACTAAGTTAAGATTGGGGGTAGTGGAAAAGTTCTATACGGCTAAACTCAATGCTGACGAGTTTAGTGTGGAAAT
CAGTGGCAAAACAGTGAGCTTCAACGTGGAGGCCATCAACGCATTATATGATCTGCCCAACGATGCTAAAACGTCTAGGCAAATATACGTGGTTAGCCCCACAAGAAGAA
TGGCTCGTGAAGCGTTGGAAGTAATCGCATGGCCTGGGGTCGCATGGGAAGTAACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCATAGAGGCGAGCGTG
TGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACTTAGAGTCATCAATGTTACTCTATTGTATAATGACGAAGAAGCGCGTCAACCT
TGGCGATCTGATAGCTACATCCATTTTGTCCTGGATGCGAGCTCCTAAGGGCGCCATGCCCCTCCCATCTACCATTGAAGCCCTCTGCGTTAAGGTCGTACCATTCCTCT
GCGCCATAAATTCAATCCCAATCCCAGGCGAAGATGACGCCAACCCAGATATCAGGGTCTCACTGCCACCACCACCGCCTGCTGTGGATACAGGCAAAAATGTTGATGAC
CCACACATTAAGGACAAAACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCAATGCCCAACCTACTACCGCGCCAGGAGAAGATGAAGATTT
GGGCGATCTATTAGGGTCCCTTGTGTGTAAGCCAATGTTTGATCATTTTGATCAAGTATTGGCTCACCAAGCTGACTAG
Protein sequenceShow/hide protein sequence
MLADLNEQVAELPAKMKALEPERNLEVIAEELEDELEAMSPLDQGPPPRKLREVAGPFKGKKKIGRSGPEERPSGSEAITKTPSINSLIKVEKGLFPFNGPLPDFLYAPI
QAFGWKQFFKGHTKLRLGVVEKFYTAKLNADEFSVEISGKTVSFNVEAINALYDLPNDAKTSRQIYVVSPTRRMAREALEVIAWPGVAWEVTPTGKYQLYPHQLTIEASV
WLFFIKKKIFPTRHDSTINLESSMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPLPSTIEALCVKVVPFLCAINSIPIPGEDDANPDIRVSLPPPPPAVDTGKNVDD
PHIKDKTPILNEVGETASSAHTTNAQPTTAPGEDEDLGDLLGSLVCKPMFDHFDQVLAHQAD