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PI0005394 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005394
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr06:17565902..17566249
RNA-Seq ExpressionPI0005394
SyntenyPI0005394
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]6.6e-1446.74Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQLNFVITV
        VV KFYA+  N  E+   +  +   FN E IN LY+ P D ETP H  + +T K+   EALE IAW  A +++TPTGK  LYPHQL    +V
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQLNFVITV

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]6.8e-1141.86Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL
        V+ KFY + LN  E+ + + G+ + FN E IN LYDLP D +TP    + +T K+  REAL+ I W     ++T T    LYPH+L
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]2.1e-1245.35Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL
        VV KFY + LN  E+ + + G+ + FN E IN LYDLP D ETP    + +T K+  REAL+ I W     ++T TG   LYPH+L
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-1045.98Show/hide
Query:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH
        M VV KFY  K N  +  + I      FN E IN LY+ PND E  G E V  +TK + +EAL+V+AWP    EV P   + QLYPH
Subjt:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-1045.98Show/hide
Query:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH
        M VV KFY  K N  +  + I      FN E IN LY+ PND E  G E V  +TK + +EAL+V+AWP    EV P   + QLYPH
Subjt:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein3.2e-1446.74Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQLNFVITV
        VV KFYA+  N  E+   +  +   FN E IN LY+ P D ETP H  + +T K+   EALE IAW  A +++TPTGK  LYPHQL    +V
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQLNFVITV

A0A5A7U4E3 Uncharacterized protein3.3e-1141.86Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL
        V+ KFY + LN  E+ + + G+ + FN E IN LYDLP D +TP    + +T K+  REAL+ I W     ++T T    LYPH+L
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL

A0A5A7URT6 Uncharacterized protein1.0e-1245.35Show/hide
Query:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL
        VV KFY + LN  E+ + + G+ + FN E IN LYDLP D ETP    + +T K+  REAL+ I W     ++T TG   LYPH+L
Subjt:  VVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQL

A0A5A7V6M5 Gag/pol protein5.6e-1145.98Show/hide
Query:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH
        M VV KFY  K N  +  + I      FN E IN LY+ PND E  G E V  +TK + +EAL+V+AWP    EV P   + QLYPH
Subjt:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH

A0A5D3C3P6 Gag/pol protein5.6e-1145.98Show/hide
Query:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH
        M VV KFY  K N  +  + I      FN E IN LY+ PND E  G E V  +TK + +EAL+V+AWP    EV P   + QLYPH
Subjt:  MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTG-KDQLYPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGGTAGAAAAATTCTACGCCGCTAAGCTCAATGCTGAGGAGTTTAGCATGGAAATCAGTGGAAGGGTGCTGAGCTTCAACGCGGAGACCATTAATGCTCTATA
TGACTTGCCCAATGATGTTGAGACTCCTGGGCATGAATATGTGGTCAGCACAACAAAGAAAATGGTCCGTGAAGCGTTAGAAGTCATCGCCTGGCCTAGAGCCGCATGGG
AAGTTACGCCGACGGGGAAAGATCAACTTTATCCACACCAGTTGAATTTCGTTATAACTGTCATCATGCTTAAGCGAGCTAATTCGCTTGGCCAGCGTTGGTCGCCAATT
ACTCGAGAGAGTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGGTAGAAAAATTCTACGCCGCTAAGCTCAATGCTGAGGAGTTTAGCATGGAAATCAGTGGAAGGGTGCTGAGCTTCAACGCGGAGACCATTAATGCTCTATA
TGACTTGCCCAATGATGTTGAGACTCCTGGGCATGAATATGTGGTCAGCACAACAAAGAAAATGGTCCGTGAAGCGTTAGAAGTCATCGCCTGGCCTAGAGCCGCATGGG
AAGTTACGCCGACGGGGAAAGATCAACTTTATCCACACCAGTTGAATTTCGTTATAACTGTCATCATGCTTAAGCGAGCTAATTCGCTTGGCCAGCGTTGGTCGCCAATT
ACTCGAGAGAGTAAGTAG
Protein sequenceShow/hide protein sequence
MGVVEKFYAAKLNAEEFSMEISGRVLSFNAETINALYDLPNDVETPGHEYVVSTTKKMVREALEVIAWPRAAWEVTPTGKDQLYPHQLNFVITVIMLKRANSLGQRWSPI
TRESK