; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005406 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005406
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr11:28160534..28161045
RNA-Seq ExpressionPI0005406
SyntenyPI0005406
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605019.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4593.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.6e-4593.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.2e-4593.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]1.6e-4593.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.6e-4592.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQG LTIPCKEDAF+DLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

TrEMBL top hitse value%identityAlignment
A0A6J1FVI4 auxin-responsive protein SAUR24-like7.8e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1G6T7 auxin-responsive protein SAUR24-like5.9e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1G6U1 auxin-responsive protein SAUR23-like1.3e-4592.78Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQG LTIPCKEDAF+DLTSRL +S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.8e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIR LSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

A0A6J1KZJ6 auxin-responsive protein SAUR24-like7.8e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        MGIRLLSLVPHAKQILKMQSGFTK QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.4e-2260.24Show/hide
Query:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRL
        AK+IL   +         PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.5e-2262.03Show/hide
Query:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR208.9e-2363.29Show/hide
Query:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +A+YVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.4e-2262.03Show/hide
Query:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +A+YVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR242.3e-2361.9Show/hide
Query:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.7e-2656.12Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS
        M IR+  ++  +KQ+LK  S  +   + +PKGH+A+YVGE +Q++RFVVP++YL+HP FQ+LL  AEEEFGF HP G LTIPC E  FIDL SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS

AT4G34810.1 SAUR-like auxin-responsive protein family8.8e-2655.24Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKGQLD------VPKGHVAIYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   + +        VPKGHVA+YVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP G LTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKGQLD------VPKGHVAIYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.0e-2657.73Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    + S  +   LDVPKG++A+YVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP G LTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family6.3e-2463.29Show/hide
Query:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +A+YVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  KMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.7e-2461.9Show/hide
Query:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +A+YVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATATTAAAGATGCAGTCAGGATTTACCAAAGGTCAATTGGACGTGCCAAAAGGCCATGTAGCTATCTA
TGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACCTAAACCATCCATCATTCCAACAACTTCTTAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATC
CACAAGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAATATCTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTTTCCAGTCCTATACCAATCAGATCAAAGCTTTAGACCTGTCGAAGAGTCTTTCTTCTCAAGCAAATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAG
CAGATATTAAAGATGCAGTCAGGATTTACCAAAGGTCAATTGGACGTGCCAAAAGGCCATGTAGCTATCTATGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGAT
ATCTTACCTAAACCATCCATCATTCCAACAACTTCTTAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCT
TCATTGATCTCACTTCTAGATTGCAAATATCTTGAAGGATGAAGAGCAAACGGCAAGCTGCCATTTTTGACAAATTTTTTTCAACTCGTGAGTTTTTGACATATGCTAGA
ATGTTGTAGAGCAGACTACCAGTAAATGAGTTCCATTGTAAAGGTGCTTTTACCAACGGGATTATAATGAAA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS