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PI0005431 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005431
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:11414947..11416045
RNA-Seq ExpressionPI0005431
SyntenyPI0005431
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]5.3e-2958.77Show/hide
Query:  SIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNT
        S YNQI  TLD++  NNEEWD+D F++ RGG GK++EG+D+NV+V  QG+MTAMNNLL+ M   QVNAA SS Q+V Q+D++GC+  GSPH ID  PLN 
Subjt:  SIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNT

Query:  ETVTFVRNDLYSNS
        E V +V++D YSN+
Subjt:  ETVTFVRNDLYSNS

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]4.6e-2551.67Show/hide
Query:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRR---GGVGKSDEG
        F+  D+ENL+DAWS  KR+VK C H+ I +C+LME FYF L++  QQT D VFVG +L++ YNQ KT LDTM+SN++E  +D   +++      G++DEG
Subjt:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRR---GGVGKSDEG

Query:  MDKNVVVALQGKMTAMNNLL
        MD+N +V LQG++T MN LL
Subjt:  MDKNVVVALQGKMTAMNNLL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.8e-4653.41Show/hide
Query:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENR------RGGVG
        M+F+Q D+ENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF G ML+S YNQIK  LDTM SN++EW ++ F +R      +G  G
Subjt:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENR------RGGVG

Query:  KSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND
        + ++G+D +++VALQG++  M N+L+SMA+ QVN   SS+Q V Q++++GCVGC +PHN +  PLNTE V +++ND
Subjt:  KSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]7.3e-3959.57Show/hide
Query:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM
        M F+Q DKEN+HD WSRFKR+VK CP + IPEC+ MEVFYFGL+K T Q  + +FVG ML+S YNQIK TLD+M +N++EWD+  F +R    G++ EG+
Subjt:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM

Query:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQID
        DK+VVV LQG+M AMNNLL+SM +SQVNAA + + AV Q++
Subjt:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQID

XP_017216983.1 PREDICTED: uncharacterized protein LOC108194534 [Daucus carota subsp. sativus]3.9e-2436.67Show/hide
Query:  SFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM-
        SFQQ D E+L+DAW RFK +++ CPH+ I  CI ME FY GLN  T+   DA   G++L   YNQ    L+T+ +NN +W      + R   GK   G+ 
Subjt:  SFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM-

Query:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQA-VNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRN----DLYSNS
        D + + +++ ++ +M ++LK++++    +   S+ + +NQ  ++ CV CG  H  D+ P N E V ++RN    D YSN+
Subjt:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQA-VNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRN----DLYSNS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein3.6e-3959.57Show/hide
Query:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM
        M F+Q DKEN+HD WSRFKR+VK CP + IPEC+ MEVFYFGL+K T Q  + +FVG ML+S YNQIK TLD+M +N++EWD+  F +R    G++ EG+
Subjt:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGM

Query:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQID
        DK+VVV LQG+M AMNNLL+SM +SQVNAA + + AV Q++
Subjt:  DKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQID

A0A5A7TUE1 Uncharacterized protein2.2e-2551.67Show/hide
Query:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRR---GGVGKSDEG
        F+  D+ENL+DAWS  KR+VK C H+ I +C+LME FYF L++  QQT D VFVG +L++ YNQ KT LDTM+SN++E  +D   +++      G++DEG
Subjt:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRR---GGVGKSDEG

Query:  MDKNVVVALQGKMTAMNNLL
        MD+N +V LQG++T MN LL
Subjt:  MDKNVVVALQGKMTAMNNLL

A0A5A7V1F3 Retrotrans_gag domain-containing protein4.2e-2437.5Show/hide
Query:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDK
        F+Q D++NLHDAWS FKRMVK C H+ I + +LME FYFGL+K T+Q+AD++F+G +L+S YNQIK  LD+M +N+++                      
Subjt:  FQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDK

Query:  NVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND
                                      S  AV  ++++ C GCG PHN D  PLN E V +V+ D
Subjt:  NVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND

A0A5D3CC26 Uncharacterized protein1.3e-4653.41Show/hide
Query:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENR------RGGVG
        M+F+Q D+ENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF G ML+S YNQIK  LDTM SN++EW ++ F +R      +G  G
Subjt:  MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENR------RGGVG

Query:  KSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND
        + ++G+D +++VALQG++  M N+L+SMA+ QVN   SS+Q V Q++++GCVGC +PHN +  PLNTE V +++ND
Subjt:  KSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRND

A0A5D3CSC7 Uncharacterized protein2.6e-2958.77Show/hide
Query:  SIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNT
        S YNQI  TLD++  NNEEWD+D F++ RGG GK++EG+D+NV+V  QG+MTAMNNLL+ M   QVNAA SS Q+V Q+D++GC+  GSPH ID  PLN 
Subjt:  SIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDKNVVVALQGKMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNT

Query:  ETVTFVRNDLYSNS
        E V +V++D YSN+
Subjt:  ETVTFVRNDLYSNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCCAGCAAAATGATAAAGAGAACTTGCACGATGCATGGAGTAGGTTCAAAAGGATGGTGAAAGTATGCCCCCACAATGACATTCCTGAATGCATATTGATGGA
GGTGTTCTATTTTGGTCTAAACAAGGCGACACAGCAGACTGCTGATGCTGTGTTTGTAGGCAGTATGTTGAAAAGCATATACAACCAGATTAAGACGACGCTAGATACAA
TGGTCAGCAACAACGAAGAATGGGATGAAGACGATTTCGAAAATCGCCGAGGAGGAGTGGGAAAAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCGTTGCAAGGA
AAAATGACTGCGATGAACAACCTGTTAAAATCAATGGCAATATCGCAGGTTAATGCCGCCGGAAGCTCTATGCAGGCGGTTAATCAAATTGATGACTTAGGATGCGTGGG
ATGTGGCAGTCCTCACAATATCGACACATTTCCACTGAATACTGAGACTGTCACGTTCGTAAGGAACGACCTCTACTCCAACAGTACAATCCTGGTTAGAGGAATCACCC
CAACTTTGGATGTGGAGGAACGGATCAACAAAACCAAGGGCAACAAGGTAGTCAAGGTGATCATCGTGGGGAAGCATCTGGCTACCACCAGAGACACCAGAACAACGACC
ACTACATCAACAACAGCACACCACCATTACTCCATCCACATCTTCATCAGTGGAAAACCTCCTCCGCGAGCGGGAGGATCCGGAAAAGAGAAGTGTCAAGCTTTGACACT
GCGAAGTGGAAGAAATTTGACCATCTGCAACCCTGAAACCGAACGTAGAAATTCCACTTCTAATTCTACTGTCGAGATCAGCAACACAAGTAACAATTCTAATCCTTTGA
ATTTTCCTTTAACTAATGATGTTTCTTCCTCGCAGAATAAAGACGTACCAAACGAAGATGTGGAAAGCATGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCCAGCAAAATGATAAAGAGAACTTGCACGATGCATGGAGTAGGTTCAAAAGGATGGTGAAAGTATGCCCCCACAATGACATTCCTGAATGCATATTGATGGA
GGTGTTCTATTTTGGTCTAAACAAGGCGACACAGCAGACTGCTGATGCTGTGTTTGTAGGCAGTATGTTGAAAAGCATATACAACCAGATTAAGACGACGCTAGATACAA
TGGTCAGCAACAACGAAGAATGGGATGAAGACGATTTCGAAAATCGCCGAGGAGGAGTGGGAAAAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCGTTGCAAGGA
AAAATGACTGCGATGAACAACCTGTTAAAATCAATGGCAATATCGCAGGTTAATGCCGCCGGAAGCTCTATGCAGGCGGTTAATCAAATTGATGACTTAGGATGCGTGGG
ATGTGGCAGTCCTCACAATATCGACACATTTCCACTGAATACTGAGACTGTCACGTTCGTAAGGAACGACCTCTACTCCAACAGTACAATCCTGGTTAGAGGAATCACCC
CAACTTTGGATGTGGAGGAACGGATCAACAAAACCAAGGGCAACAAGGTAGTCAAGGTGATCATCGTGGGGAAGCATCTGGCTACCACCAGAGACACCAGAACAACGACC
ACTACATCAACAACAGCACACCACCATTACTCCATCCACATCTTCATCAGTGGAAAACCTCCTCCGCGAGCGGGAGGATCCGGAAAAGAGAAGTGTCAAGCTTTGACACT
GCGAAGTGGAAGAAATTTGACCATCTGCAACCCTGAAACCGAACGTAGAAATTCCACTTCTAATTCTACTGTCGAGATCAGCAACACAAGTAACAATTCTAATCCTTTGA
ATTTTCCTTTAACTAATGATGTTTCTTCCTCGCAGAATAAAGACGTACCAAACGAAGATGTGGAAAGCATGAGGTGA
Protein sequenceShow/hide protein sequence
MSFQQNDKENLHDAWSRFKRMVKVCPHNDIPECILMEVFYFGLNKATQQTADAVFVGSMLKSIYNQIKTTLDTMVSNNEEWDEDDFENRRGGVGKSDEGMDKNVVVALQG
KMTAMNNLLKSMAISQVNAAGSSMQAVNQIDDLGCVGCGSPHNIDTFPLNTETVTFVRNDLYSNSTILVRGITPTLDVEERINKTKGNKVVKVIIVGKHLATTRDTRTTT
TTSTTAHHHYSIHIFISGKPPPRAGGSGKEKCQALTLRSGRNLTICNPETERRNSTSNSTVEISNTSNNSNPLNFPLTNDVSSSQNKDVPNEDVESMR