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PI0005457 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005457
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:21116475..21117179
RNA-Seq ExpressionPI0005457
SyntenyPI0005457
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.3e-2446.32Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL

Query:  CLKAVPFLSAIQTISIPGGLCNQMALNRMITFHGHK
         +KA P L   Q + +  G+C    L+R IT H +K
Subjt:  CLKAVPFLSAIQTISIPGGLCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]3.3e-2855.65Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA

Query:  LCLKAV-PFLSAIQTISIPGGLCN
        LCLK +      I  I + GG CN
Subjt:  LCLKAV-PFLSAIQTISIPGGLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]5.2e-2650.41Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL

Query:  CLKAVPFL-SAIQTISIPGGLCN
        CL++   L  + Q   +  G+CN
Subjt:  CLKAVPFL-SAIQTISIPGGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-2855.83Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV

Query:  EALCLKAVPFLSAIQTISIP
        E LCLK +P L      +IP
Subjt:  EALCLKAVPFLSAIQTISIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.3e-2855.65Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA

Query:  LCLKAV-PFLSAIQTISIPGGLCN
        LCLK +      I  I + GG CN
Subjt:  LCLKAV-PFLSAIQTISIPGGLCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase1.6e-2855.65Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA

Query:  LCLKAV-PFLSAIQTISIPGGLCN
        LCLK +      I  I + GG CN
Subjt:  LCLKAV-PFLSAIQTISIPGGLCN

A0A5A7V6M5 Gag/pol protein1.6e-2855.83Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV

Query:  EALCLKAVPFLSAIQTISIP
        E LCLK +P L      +IP
Subjt:  EALCLKAVPFLSAIQTISIP

A0A5D3CVL7 Uncharacterized protein1.6e-2855.65Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEA

Query:  LCLKAV-PFLSAIQTISIPGGLCN
        LCLK +      I  I + GG CN
Subjt:  LCLKAV-PFLSAIQTISIPGGLCN

A0A5D3CW17 Uncharacterized protein6.3e-2546.32Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL

Query:  CLKAVPFLSAIQTISIPGGLCNQMALNRMITFHGHK
         +KA P L   Q + +  G+C    L+R IT H +K
Subjt:  CLKAVPFLSAIQTISIPGGLCNQMALNRMITFHGHK

A0A5D3DVQ6 Uncharacterized protein2.5e-2650.41Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEAL

Query:  CLKAVPFL-SAIQTISIPGGLCN
        CL++   L  + Q   +  G+CN
Subjt:  CLKAVPFL-SAIQTISIPGGLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGT
GTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACC
TTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCAATGCCCTTCCCTTCAACCGTTGAGGCCCTTTGCCTTAAAGCTGTGCCATTCTTA
TCCGCCATCCAAACCATCTCAATACCTGGCGGGCTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATT
AGGCGACACGCCTAAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCAGTCGTCGCATCAACCCCCCTACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAAC
AACTTCCACTGAAATTTCCCCACTCCTCATCTCGCCCAATACAGCGAGCTCCACCATCAGTCCAAAATTCCAGCAACTCCAATCCTCCCTGCTCTTCTTCGCCCATTCTA
ATCAACCCATCATCCCCAACTATCTCTCCCCGCCAAGACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGTGT
GTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTCAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACC
TTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCAATGCCCTTCCCTTCAACCGTTGAGGCCCTTTGCCTTAAAGCTGTGCCATTCTTA
TCCGCCATCCAAACCATCTCAATACCTGGCGGGCTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATT
AGGCGACACGCCTAAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCAGTCGTCGCATCAACCCCCCTACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAAC
AACTTCCACTGAAATTTCCCCACTCCTCATCTCGCCCAATACAGCGAGCTCCACCATCAGTCCAAAATTCCAGCAACTCCAATCCTCCCTGCTCTTCTTCGCCCATTCTA
ATCAACCCATCATCCCCAACTATCTCTCCCCGCCAAGACAATTAA
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKAVPFL
SAIQTISIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTPKGMALAERKRKAPVVASTPLPKAKKTKVLATKQLPLKFPHSSSRPIQRAPPSVQNSSNSNPPCSSSPIL
INPSSPTISPRQDN