; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005463 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005463
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontrafficking protein particle complex subunit 2
Genome locationchr11:30935407..30940845
RNA-Seq ExpressionPI0005463
SyntenyPI0005463
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147330.1 transport protein particle 20 kDa subunit [Cucumis sativus]8.4e-6999.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_008460820.1 PREDICTED: trafficking protein particle complex subunit 2 isoform X2 [Cucumis melo]2.4e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_022157725.1 transport protein particle 20 kDa subunit [Momordica charantia]7.1e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_022947789.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata]1.9e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_038900562.1 transport protein particle 20 kDa subunit [Benincasa hispida]6.4e-69100Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

TrEMBL top hitse value%identityAlignment
A0A1S3CCU2 trafficking protein particle complex subunit 2 isoform X21.2e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A1S4E319 trafficking protein particle complex subunit 2 isoform X12.9e-6798.53Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEV
        MA TACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG HTRLMLLHDSRNDDGIKSFFQEV
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAG-HTRLMLLHDSRNDDGIKSFFQEV

Query:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  HELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1DTW9 transport protein particle 20 kDa subunit3.4e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1G7X4 transport protein particle 20 kDa subunit isoform X29.1e-6999.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1I1U1 transport protein particle 20 kDa subunit isoform X29.1e-6999.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

SwissProt top hitse value%identityAlignment
E2QV03 Trafficking protein particle complex subunit 21.5e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

F1SRI0 Trafficking protein particle complex subunit 21.5e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

P0DI81 Trafficking protein particle complex subunit 21.9e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

P0DI82 Trafficking protein particle complex subunit 2B1.9e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Q3T0F2 Trafficking protein particle complex subunit 21.5e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Arabidopsis top hitse value%identityAlignment
AT1G80500.1 SNARE-like superfamily protein2.6e-6891.85Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIV RN+IPIYEAEVGSA KRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIK +LNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCACAGCTTGTTTCATAATTGTCAGTAGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTT
TATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTTGATAGGTTCAATGATTTGGTGGTGTCTGTATATGTAA
CCGCCGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAACGACGATGGAATCAAGAGCTTTTTTCAAGAGGTTCACGAGCTTTACATAAAGACTATACTCAATCCC
CTCTACTTGCCTGGATCCCGCATTACGTCTTCACATTTTGACACAAAAGTCCGTGCACTCGCAAGGAAGTATCTCTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAATTTTGTGTTGGAGCCTAGTTCCAAACCCCAAGGGCAAACAGCCCGACCCAAACCCAGCCCATCTGGCGTGCCCACCCCCTTCCCTTAACTCTCTGACATCTCAC
TCCACCGGAGACCTTCCGAATTGCTTCTCAGAATGGCGACCACAGCTTGTTTCATAATTGTCAGTAGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGTT
AAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTTGATAG
GTTCAATGATTTGGTGGTGTCTGTATATGTAACCGCCGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAACGACGATGGAATCAAGAGCTTTTTTCAAGAGGTTC
ACGAGCTTTACATAAAGACTATACTCAATCCCCTCTACTTGCCTGGATCCCGCATTACGTCTTCACATTTTGACACAAAAGTCCGTGCACTCGCAAGGAAGTATCTCTAG
TGATCACCTTCATCGCTGACCAATTGTGCTTCGCGACAATGCTTCAAAGTTTATAGCAGCCCTGAGTTTTCTTTTAACTGCATCACATTTTTATATTTGCTATTTGTGGT
CCTGAAAATTCAGTAGTTAAATATCTCTCAATTTGTAATATTGACTTTGGAATGGCTTGGTAACGAGTTGGAATTGCACTTTACAGTAATGCATTAGCCACTCCCTTTTT
ACTCATCTTTTATTGTAGGGAGTAATATCATTATTTGTTGTTATAAGAAGGCAGTGGATGTGGGATATTAAAGTTATGCAAAATATGCATTTTTTGAAAAGCTAAGAGAC
GGTTCATTCCTTTTCAACTTTTTTGGCTATTGGTCCTTTCCATTACCTGTACTTGTAATGAATGATTAGTATGGC
Protein sequenceShow/hide protein sequence
MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNP
LYLPGSRITSSHFDTKVRALARKYL