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PI0005471 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005471
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr03:20694643..20694846
RNA-Seq ExpressionPI0005471
SyntenyPI0005471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035596.1 hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]3.5e-0755.36Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
        M VV+KFY A  +  +F   I GKKV F+ +AIN+LYDLPND   PRQA + +PTK
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]1.3e-0648.44Show/hide
Query:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
        V+ KFY +  N  ++   + GK + FNV+AIN LYDLP D  TP QA +    KRQ REAL+ I
Subjt:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]1.0e-0650Show/hide
Query:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
        VV KFY +  N  ++   + GK + FNV+AIN LYDLP D  TP QA +    KRQ REAL+ I
Subjt:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
TYK15881.1 hypothetical protein E5676_scaffold637G00610 [Cucumis melo var. makuwa]3.3e-0549.12Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKR
        M  V+KFY  K +  D    I G K+ FN K I++LYDLPND    RQA + +PTKR
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKR
TYK30940.1 hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa]3.5e-0755.36Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
        M VV+KFY A  +  +F   I GKKV F+ +AIN+LYDLPND   PRQA + +PTK
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
TrEMBL top hitse value%identityAlignment
A0A5A7T079 Uncharacterized protein1.7e-0755.36Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
        M VV+KFY A  +  +F   I GKKV F+ +AIN+LYDLPND   PRQA + +PTK
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
A0A5A7U4E3 Uncharacterized protein6.4e-0748.44Show/hide
Query:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
        V+ KFY +  N  ++   + GK + FNV+AIN LYDLP D  TP QA +    KRQ REAL+ I
Subjt:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
A0A5A7UIL5 Uncharacterized protein1.6e-0546.67Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTR
        M  V+KFY  K +  D    I G K+ FN K I++LYDLPND    RQA + +PTKR  +
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTR
A0A5A7URT6 Uncharacterized protein4.9e-0750Show/hide
Query:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
        VV KFY +  N  ++   + GK + FNV+AIN LYDLP D  TP QA +    KRQ REAL+ I
Subjt:  VVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVI
A0A5D3E5P6 Uncharacterized protein1.7e-0755.36Show/hide
Query:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
        M VV+KFY A  +  +F   I GKKV F+ +AIN+LYDLPND   PRQA + +PTK
Subjt:  MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGGTAAATAAATTCTACGGTGCAAAACCCAACGCCAAAGATTTTAACGACCAAATAGGTGGAAAGAAGGTGAGCTTCAACGTCAAGGCCATCAACGACCTATA
CGACTTGCCTAATGACACAAATACACCAAGGCAGGCGTATGTGGTCAGGCCTACAAAGAGACAGACCCGTGAAGCGTTGGAAGTGATCGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTGGTAAATAAATTCTACGGTGCAAAACCCAACGCCAAAGATTTTAACGACCAAATAGGTGGAAAGAAGGTGAGCTTCAACGTCAAGGCCATCAACGACCTATA
CGACTTGCCTAATGACACAAATACACCAAGGCAGGCGTATGTGGTCAGGCCTACAAAGAGACAGACCCGTGAAGCGTTGGAAGTGATCGCCTGA
Protein sequenceShow/hide protein sequence
MGVVNKFYGAKPNAKDFNDQIGGKKVSFNVKAINDLYDLPNDTNTPRQAYVVRPTKRQTREALEVIA