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PI0005481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:16409476..16409976
RNA-Seq ExpressionPI0005481
SyntenyPI0005481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.6e-2764.95Show/hide
Query:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGEN  FEIK +ML M QN  QFGGH  EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.0e-3266.67Show/hide
Query:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKE
        NN+  P   AA   N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN  QF  H  +DPH++IR+FYSICASFHMPGIS +E
Subjt:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.5e-3846.15Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMENNNRNA-----------------PPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVF
        MS+G+ P F++DPEIERTFRR  R+ +QR++ +    N +A                    HA  + N   +AHD +RP+R YA+PNLYNF PGI  P F
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMENNNRNA-----------------PPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVF

Query:  GENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEVGTW
          N RFE+K VMLQM+Q   QFGG  GEDPH H++SF  IC++F M G+    +R  LFP +LR EA++WA + E  E+ TW
Subjt:  GENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEVGTW

XP_038880318.1 uncharacterized protein LOC120071956 [Benincasa hispida]1.5e-2756.73Show/hide
Query:  IRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEV
        +R+YAAP LY+F+P IA P   ENARFEIK+VMLQMIQN RQFGG  GEDP+  + SF  +C +F +PG++P+ +R   FP TLR EAKRWA++LE ++ 
Subjt:  IRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEV

Query:  GTWN
         +W+
Subjt:  GTWN

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.4e-3347.9Show/hide
Query:  MSDGEQPQFELDPEIERTF--RRNRRRARQRQARRMENNNRNAPPPHAALE---PNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVM
        MS    P+FE +PEI+ TF  R ++ RA +R+    +NNN  AP  +  +     +  ++A D + PIR+YAAPNLY+F+PGI+ P+  ENARFEIK VM
Subjt:  MSDGEQPQFELDPEIERTF--RRNRRRARQRQARRMENNNRNAPPPHAALE---PNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVM

Query:  LQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEV
        +QMIQN RQF     E+PH H+  F  +C++F +PGI+P  +R  LFP TLR +AKRWA++LE +E+
Subjt:  LQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEV

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein1.5e-2551.85Show/hide
Query:  NAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEA
        N   +AH+L+ PI  YA+P+LY FN GI YP FG NARF++K  ML MIQ T QFGG+L EDP +HI+S Y +C+SFH+P +S ++L    F  TL+ + 
Subjt:  NAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEA

Query:  KRWANALE
        K+W   LE
Subjt:  KRWANALE

A0A5A7UDN8 Uncharacterized protein1.2e-2764.95Show/hide
Query:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGEN  FEIK +ML M QN  QFGGH  EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGIS

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.61.1e-2055.56Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMEN--NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ     N  NN+ AP   A    N  Y+AH+ DRPIRS  +PNLY FNPGI YP FGEN RF+IK VML +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMEN--NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQM

Query:  IQ---NTR
        +    NTR
Subjt:  IQ---NTR

A0A5A7V2U7 Putative disease resistance RPP13-like protein 19.9e-3366.67Show/hide
Query:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKE
        NN+  P   AA   N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN  QF  H  +DPH++IR+FYSICASFHMPGIS +E
Subjt:  NNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPGISPKE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 12.0e-2560.78Show/hide
Query:  MENNNRNAPPPHAAL--EPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPG
        M +N  N  P ++A   + N   +AH+LD PIR+Y + NLY+FN GIAY VFGENA FE+K VMLQMIQ   QF G+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPPPHAAL--EPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAGCCACAATTCGAACTTGACCCTGAAATTGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGCAAGAAGAATGGAAAACAA
TAACAGAAACGCCCCTCCACCGCATGCTGCCCTAGAACCCAATGCCGCCTACATGGCACATGATTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACT
TTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAAACTGTCATGCTTCAGATGATTCAGAACACCAGACAATTCGGCGGTCATCTTGGG
GAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTTTGAG
GGGTGAGGCGAAGAGGTGGGCCAACGCCTTGGAAGATGACGAGGTGGGAACATGGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAGCCACAATTCGAACTTGACCCTGAAATTGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGCAAGAAGAATGGAAAACAA
TAACAGAAACGCCCCTCCACCGCATGCTGCCCTAGAACCCAATGCCGCCTACATGGCACATGATTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACT
TTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAAACTGTCATGCTTCAGATGATTCAGAACACCAGACAATTCGGCGGTCATCTTGGG
GAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTTTGAG
GGGTGAGGCGAAGAGGTGGGCCAACGCCTTGGAAGATGACGAGGTGGGAACATGGAACTAA
Protein sequenceShow/hide protein sequence
MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMENNNRNAPPPHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKTVMLQMIQNTRQFGGHLG
EDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRGEAKRWANALEDDEVGTWN