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PI0005483 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005483
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:4484456..4484665
RNA-Seq ExpressionPI0005483
SyntenyPI0005483
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]5.0e-0958.06Show/hide
Query:  RRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        RRGRQVA  V  T +ANRA    ++ SNPH + +QN EE+MF+RFAQR+ DH MP  S VDK
Subjt:  RRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]1.0e-0963.79Show/hide
Query:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        QVA  VQ+ G ANRA  LDEM SNPH    QN EE+MFNRFAQR+ADH++P  S V+K
Subjt:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

KAE8646802.1 hypothetical protein Csa_005391, partial [Cucumis sativus]1.0e-0654.84Show/hide
Query:  MALRGRPRRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMP
        +ALRGR RRGRQV T V  TG  N A E +E+  NPH   +QN EE+MF  FAQR+ +  MP
Subjt:  MALRGRPRRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMP

KAE8648186.1 hypothetical protein Csa_018470 [Cucumis sativus]1.2e-0759.02Show/hide
Query:  RGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        RG QV T V  TGRANRA E DEM SNPH    QN EE++F+ FAQR  DH +   S VDK
Subjt:  RGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]2.2e-0962.07Show/hide
Query:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        QVA  VQ+ G ANRA  LDEM SNPH    QN EE+MFNRFA+R+ADH++P  S V+K
Subjt:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein2.4e-0958.06Show/hide
Query:  RRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        RRGRQVA  V  T +ANRA    ++ SNPH + +QN EE+MF+RFAQR+ DH MP  S VDK
Subjt:  RRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

A0A5A7UFQ1 Uncharacterized protein4.9e-1063.79Show/hide
Query:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        QVA  VQ+ G ANRA  LDEM SNPH    QN EE+MFNRFAQR+ADH++P  S V+K
Subjt:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

A0A5D3BUF6 Uncharacterized protein1.5e-0649.28Show/hide
Query:  MALRGRPRRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        MA R R R  RQV   V AT  AN+  E +E+ +NP+   KQN E++MF+RF QR+ DH MP+  +VDK
Subjt:  MALRGRPRRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

A0A5D3DVY7 Uncharacterized protein1.1e-0962.07Show/hide
Query:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        QVA  VQ+ G ANRA  LDEM SNPH    QN EE+MFNRFA+R+ADH++P  S V+K
Subjt:  QVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

A0A5D3DXF8 Uncharacterized protein4.7e-0556Show/hide
Query:  TGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK
        T  ANR  E +++ SNPH    QNAEE MF+RFAQR+ D  MP+ S VDK
Subjt:  TGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTGCGAGGAAGGCCAAGACGAGGAAGACAAGTGGCAACTAGAGTCCAAGCTACTGGGAGAGCTAATAGAGCGCCTGAATTGGATGAAATGTTGAGTAATCCACA
TGTAGCAACTAAGCAAAATGCAGAGGAAAATATGTTCAATCGTTTTGCTCAGAGAATGGCGGATCATATTATGCCATCAAACTCCGTAGTAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTGCGAGGAAGGCCAAGACGAGGAAGACAAGTGGCAACTAGAGTCCAAGCTACTGGGAGAGCTAATAGAGCGCCTGAATTGGATGAAATGTTGAGTAATCCACA
TGTAGCAACTAAGCAAAATGCAGAGGAAAATATGTTCAATCGTTTTGCTCAGAGAATGGCGGATCATATTATGCCATCAAACTCCGTAGTAGATAAGTGA
Protein sequenceShow/hide protein sequence
MALRGRPRRGRQVATRVQATGRANRAPELDEMLSNPHVATKQNAEENMFNRFAQRMADHIMPSNSVVDK