; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005510 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005510
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:16319719..16320715
RNA-Seq ExpressionPI0005510
SyntenyPI0005510
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]7.9e-5956.1Show/hide
Query:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI
        M SY KFL DILAKKRRIND +T+AL QATSD+ KNGV +KMT PGSF VPCSI GMDLG  LCDLGA+INLMPLSIFKKL I +VQP  MR Q  DRSI
Subjt:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI

Query:  ATPEGKIEDALVKEEVF-----ELLSSEEFFEENLHIIEEVNAVSGER-----------------------KSEPLDLSTKGEKRIKTSTEEPPELELRP
          P+GKIED LVK + F      ++   E  EE L I+  +   +G                          +    L  + EK  K S  EP ELEL+P
Subjt:  ATPEGKIEDALVKEEVF-----ELLSSEEFFEENLHIIEEVNAVSGER-----------------------KSEPLDLSTKGEKRIKTSTEEPPELELRP

Query:  LPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT
        LP+HLKY YLGENDTLP IIS HLN  EE+ LLN LK+HKK IGWT
Subjt:  LPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]7.4e-5761.14Show/hide
Query:  ATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIED-----------------AL
        ATSD+ KNG+P+KMT+P SFTVPCSIG MDLG ALC+L  +INLM LSIFKKL I +VQP  +RL F D+ IA PE KI+D                   
Subjt:  ATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIED-----------------AL

Query:  VKEEVFELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLK
         KE   EL S+EEFFEE+   +I++EVN VS E+K E LDL  KGEK+ K S EEPPELEL+ LP+HLKY YL ENDTLPV ISTHL+V +EK LLNMLK
Subjt:  VKEEVFELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLK

Query:  RHKKPIGWTKV
        RHKK I WT V
Subjt:  RHKKPIGWTKV

TYJ96947.1 integrase [Cucumis melo var. makuwa]3.4e-5459.81Show/hide
Query:  MTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIEDALVKEEVFELLSSEEFFEEN--LHIIEEVNAV
        MTD GSF V CSIG M LG +LCDLGA+INLMPLSIFKK  IG+VQP  MRLQF DRSIA  + KI+D   +E  ++L ++E+F EE+   +I+EEVN V
Subjt:  MTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIEDALVKEEVFELLSSEEFFEEN--LHIIEEVNAV

Query:  SGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT-------------------KV
        SGE+K E LDL TKGEK+ K+S EEPPELEL+P  +HLKYAYLG NDTL +IISTHL+  EEK+LLN+LK HKK  GWT                   +V
Subjt:  SGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT-------------------KV

Query:  KRAPFSFRG
        KRAPFS +G
Subjt:  KRAPFSFRG

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]4.2e-6063.29Show/hide
Query:  VKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPE
        VKFLKDIL KKR+IND + VALTQAT+++ KNGVPKKMTDPGSFT+P SIG +DLG ALC+L A +NL+PLSIFKKL IG+VQP  MRLQ  D       
Subjt:  VKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPE

Query:  GKIEDALVKEEVFELLSSEEFFEENL--HIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEK
              L++E  +EL S+EEF EE+   + +EEVN   G+RK EPLDL TK EK+IK S +EP ELEL+PLP+HLKYAYLGENDTLP+IIS HL+  +E 
Subjt:  GKIEDALVKEEVFELLSSEEFFEENL--HIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEK

Query:  MLLNMLK
         LL MLK
Subjt:  MLLNMLK

XP_030483376.1 uncharacterized protein LOC115699972 [Cannabis sativa]6.5e-5350.4Show/hide
Query:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI
        M +YVKFLKDIL KKRR+ + ETVALT+  S +LK+ +P K+ DPGSFT+PCSIGG D+G ALCDLGA+INLMP+SIFKKLGIG+ +P  + LQ  DRS+
Subjt:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI

Query:  ATPEGKIEDALVKE-----------EVFELLSSEEFFEE-----------------------NLHIIEEVNAVSGERKS-EPLDLSTKGEKRIKTSTEEP
        A PEGKIED LV              V + + +E+F +E                        +  +E +  +   +K  E L+L     K  K S +EP
Subjt:  ATPEGKIEDALVKE-----------EVFELLSSEEFFEE-----------------------NLHIIEEVNAVSGERKS-EPLDLSTKGEKRIKTSTEEP

Query:  PELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKK
        P+LEL+PLPSHLKYAYLGENDTLPVII+++L V  E  LL +LK+HKK
Subjt:  PELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKK

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein3.6e-5761.14Show/hide
Query:  ATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIED-----------------AL
        ATSD+ KNG+P+KMT+P SFTVPCSIG MDLG ALC+L  +INLM LSIFKKL I +VQP  +RL F D+ IA PE KI+D                   
Subjt:  ATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIED-----------------AL

Query:  VKEEVFELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLK
         KE   EL S+EEFFEE+   +I++EVN VS E+K E LDL  KGEK+ K S EEPPELEL+ LP+HLKY YL ENDTLPV ISTHL+V +EK LLNMLK
Subjt:  VKEEVFELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLK

Query:  RHKKPIGWTKV
        RHKK I WT V
Subjt:  RHKKPIGWTKV

A0A5D3BCU9 Integrase1.7e-5459.81Show/hide
Query:  MTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIEDALVKEEVFELLSSEEFFEEN--LHIIEEVNAV
        MTD GSF V CSIG M LG +LCDLGA+INLMPLSIFKK  IG+VQP  MRLQF DRSIA  + KI+D   +E  ++L ++E+F EE+   +I+EEVN V
Subjt:  MTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIEDALVKEEVFELLSSEEFFEEN--LHIIEEVNAV

Query:  SGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT-------------------KV
        SGE+K E LDL TKGEK+ K+S EEPPELEL+P  +HLKYAYLG NDTL +IISTHL+  EEK+LLN+LK HKK  GWT                   +V
Subjt:  SGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT-------------------KV

Query:  KRAPFSFRG
        KRAPFS +G
Subjt:  KRAPFSFRG

A0A5D3BDT2 RT_RNaseH domain-containing protein3.8e-5956.1Show/hide
Query:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI
        M SY KFL DILAKKRRIND +T+AL QATSD+ KNGV +KMT PGSF VPCSI GMDLG  LCDLGA+INLMPLSIFKKL I +VQP  MR Q  DRSI
Subjt:  MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSI

Query:  ATPEGKIEDALVKEEVF-----ELLSSEEFFEENLHIIEEVNAVSGER-----------------------KSEPLDLSTKGEKRIKTSTEEPPELELRP
          P+GKIED LVK + F      ++   E  EE L I+  +   +G                          +    L  + EK  K S  EP ELEL+P
Subjt:  ATPEGKIEDALVKEEVF-----ELLSSEEFFEENLHIIEEVNAVSGER-----------------------KSEPLDLSTKGEKRIKTSTEEPPELELRP

Query:  LPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT
        LP+HLKY YLGENDTLP IIS HLN  EE+ LLN LK+HKK IGWT
Subjt:  LPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWT

A0A5D3BM69 Uncharacterized protein2.0e-6063.29Show/hide
Query:  VKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPE
        VKFLKDIL KKR+IND + VALTQAT+++ KNGVPKKMTDPGSFT+P SIG +DLG ALC+L A +NL+PLSIFKKL IG+VQP  MRLQ  D       
Subjt:  VKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPE

Query:  GKIEDALVKEEVFELLSSEEFFEENL--HIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEK
              L++E  +EL S+EEF EE+   + +EEVN   G+RK EPLDL TK EK+IK S +EP ELEL+PLP+HLKYAYLGENDTLP+IIS HL+  +E 
Subjt:  GKIEDALVKEEVFELLSSEEFFEENL--HIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEK

Query:  MLLNMLK
         LL MLK
Subjt:  MLLNMLK

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein6.3e-4656.57Show/hide
Query:  GVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIE-------------------DALVKEEVF
        G  +K+TDP S T+P SI  M L  AL DL  +INLMPLSI KKL IG+VQ   MRLQ  +RSIA PEGKIE                   D   +E  +
Subjt:  GVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIE-------------------DALVKEEVF

Query:  ELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKK
        EL S++EF EE+   +I++EVN VSG+ K E LDL TKGE + + S EEPP+LEL+PLP+HLKYAYL ENDTLPV I  HL+V EEK LLNMLKRHKK
Subjt:  ELLSSEEFFEEN--LHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCATATGTGAAATTCTTAAAAGACATCTTGGCAAAGAAAAGAAGGATAAATGATTGCGAAACAGTTGCTCTAACACAAGCAACAAGCGACGTCTTAAAAAATGG
GGTACCCAAGAAGATGACAGACCCTGGTAGCTTCACGGTACCTTGCTCAATAGGCGGGATGGATCTAGGTTGCGCATTATGCGATCTGGGAGCCAACATTAATCTGATGC
CTCTTTCTATCTTCAAGAAATTAGGGATAGGAAAAGTACAACCAAATTTTATGAGGCTCCAATTCATTGATCGATCCATTGCAACGCCTGAAGGAAAAATTGAAGATGCT
TTGGTAAAGGAAGAAGTTTTTGAGCTGCTGAGCTCTGAAGAATTCTTTGAGGAAAATCTCCATATTATAGAGGAAGTAAACGCCGTGTCTGGCGAAAGAAAGTCAGAACC
TTTGGATCTATCAACCAAAGGCGAGAAGAGGATTAAGACATCCACTGAGGAACCACCAGAATTAGAGTTAAGGCCTTTGCCAAGCCACCTGAAGTATGCATATCTGGGGG
AGAATGACACCCTGCCCGTCATAATCTCCACCCACTTGAATGTCGTAGAAGAAAAGATGTTGTTGAATATGCTCAAACGCCATAAGAAGCCGATAGGATGGACCAAGGTC
AAAAGGGCACCATTCAGTTTCAGAGGCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCATATGTGAAATTCTTAAAAGACATCTTGGCAAAGAAAAGAAGGATAAATGATTGCGAAACAGTTGCTCTAACACAAGCAACAAGCGACGTCTTAAAAAATGG
GGTACCCAAGAAGATGACAGACCCTGGTAGCTTCACGGTACCTTGCTCAATAGGCGGGATGGATCTAGGTTGCGCATTATGCGATCTGGGAGCCAACATTAATCTGATGC
CTCTTTCTATCTTCAAGAAATTAGGGATAGGAAAAGTACAACCAAATTTTATGAGGCTCCAATTCATTGATCGATCCATTGCAACGCCTGAAGGAAAAATTGAAGATGCT
TTGGTAAAGGAAGAAGTTTTTGAGCTGCTGAGCTCTGAAGAATTCTTTGAGGAAAATCTCCATATTATAGAGGAAGTAAACGCCGTGTCTGGCGAAAGAAAGTCAGAACC
TTTGGATCTATCAACCAAAGGCGAGAAGAGGATTAAGACATCCACTGAGGAACCACCAGAATTAGAGTTAAGGCCTTTGCCAAGCCACCTGAAGTATGCATATCTGGGGG
AGAATGACACCCTGCCCGTCATAATCTCCACCCACTTGAATGTCGTAGAAGAAAAGATGTTGTTGAATATGCTCAAACGCCATAAGAAGCCGATAGGATGGACCAAGGTC
AAAAGGGCACCATTCAGTTTCAGAGGCGATTAA
Protein sequenceShow/hide protein sequence
MSSYVKFLKDILAKKRRINDCETVALTQATSDVLKNGVPKKMTDPGSFTVPCSIGGMDLGCALCDLGANINLMPLSIFKKLGIGKVQPNFMRLQFIDRSIATPEGKIEDA
LVKEEVFELLSSEEFFEENLHIIEEVNAVSGERKSEPLDLSTKGEKRIKTSTEEPPELELRPLPSHLKYAYLGENDTLPVIISTHLNVVEEKMLLNMLKRHKKPIGWTKV
KRAPFSFRGD