CuGenDBv2

Gene ID	PI0005513
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	S-protein homolog
Genome location	chr05:16962051..16962420
RNA-Seq Expression	PI0005513
Synteny	PI0005513
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8651787.1 hypothetical protein Csa_006214, partial [Cucumis sativus]

7.4e-52

82.79

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCG+FKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQ
        WLVTEDGFYFS DEINWKKDFQ
Subjt:  WLVTEDGFYFSPDEINWKKDFQ

XP_004139019.1 S-protein homolog 5 [Cucumis sativus]

5.1e-53

82.93

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCG+FKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFS DEINWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

XP_016902587.1 PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo]

3.5e-54

82.93

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCGNFKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFSPDEINWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

XP_038875011.1 S-protein homolog 5-like [Benincasa hispida]

7.4e-52

80.49

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        MFIIQPDRLYL+GVVFEVRVINGFKNNSSLPLVIWCSS+ESDLGGRALQEHDDFSWKVTTKLWK  +                  VPRDFYRCGNFKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFSPDE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

XP_038875976.1 S-protein homolog 5-like isoform X1 [Benincasa hispida]

1.5e-52

81.3

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        MFII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCGNFKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFSPDE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNI8 S-protein homolog

2.5e-53

82.93

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCG+FKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFS DEINWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

A0A1S4E2Y6 S-protein homolog

1.7e-54

82.93

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCGNFKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFSPDEINWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

A0A5D3CZS1 S-protein homolog

1.7e-54

82.93

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS
        +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ                  VPRDFYRCGNFKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQ----------------SLVPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLVTEDGFYFSPDEINWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

A0A6J1HNC1 S-protein homolog

2.6e-50

77.24

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSL----------------VPRDFYRCGNFKKCS
        +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQ                  VPRDFYRCG FKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSL----------------VPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLV EDGFYFSPDE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

A0A6J1KN10 S-protein homolog

2.6e-50

77.24

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Query:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSL----------------VPRDFYRCGNFKKCS
        +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQ                  VPRDFYRCG FKKCS
Subjt:  MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSL----------------VPRDFYRCGNFKKCS

Query:  WLVTEDGFYFSPDEINWKKDFQW
        WLV EDGFYFSPDE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEINWKKDFQW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G24060.1 Plant self-incompatibility protein S1 family

5.9e-31

51.64

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Query:  IIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLW-----------------KSNQSLVPRDFYRCGNFKKCSW
        ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     LW                 +     V RD  RCG+ KKCSW
Subjt:  IIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLW-----------------KSNQSLVPRDFYRCGNFKKCSW

Query:  LVTEDGFYFSPDEINWKKDFQW
         V EDGFYFS DE+ W KDF W
Subjt:  LVTEDGFYFSPDEINWKKDFQW

Sequences

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CDS sequence

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ATGTTCATCATACAACCAGATAGGTTATACCTGCACGGCGTCGTTTTCGAGGTTCGCGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTC
CTCAAAAGAGAGTGATTTGGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATCTCTTGTTCCTAGGGACT
TCTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGATTAATTGGAAGAAGGATTTTCAATGGTGA

mRNA sequence

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Protein sequence

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MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQSLVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDFQW

PI0005513 (gene) of Melon (PI 482460) v1 genome