CuGenDBv2

Gene ID	PI0005538
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein CWC15 homolog
Genome location	chr06:26994791..26999316
RNA-Seq Expression	PI0005538
Synteny	PI0005538
Gene Ontology terms	GO:0045292 - mRNA cis splicing, via spliceosome (biological process) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR006973 - Pre-mRNA-splicing factor Cwf15/Cwc15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK13779.1 protein CWC15-like protein [Cucumis melo var. makuwa]

2.3e-111

93.85

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDE---------------SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS
        RIIPRSLDADDSDVDVKSDDE               SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS
Subjt:  RIIPRSLDADDSDVDVKSDDE---------------SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS

Query:  VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
        VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK

XP_004149567.1 protein CWC15 homolog [Cucumis sativus]

1.2e-112

99.56

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIPRSLDADDSDVDVKSDDES DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGESKTPKRFINDTIRNDFHRKFLQKYMK
        RGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  RGESKTPKRFINDTIRNDFHRKFLQKYMK

XP_008449060.1 PREDICTED: protein CWC15 homolog [Cucumis melo]

8.5e-114

99.56

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGESKTPKRFINDTIRNDFHRKFLQKYMK
        RGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  RGESKTPKRFINDTIRNDFHRKFLQKYMK

XP_022950134.1 protein CWC15 homolog isoform X2 [Cucurbita moschata]

4.0e-111

97.83

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSD+ESDDD DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK
        ARGE+KTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK

XP_038905802.1 protein CWC15 homolog [Benincasa hispida]

2.2e-114

100

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGESKTPKRFINDTIRNDFHRKFLQKYMK
        RGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  RGESKTPKRFINDTIRNDFHRKFLQKYMK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L647 Uncharacterized protein

6.0e-113

99.56

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIPRSLDADDSDVDVKSDDES DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGESKTPKRFINDTIRNDFHRKFLQKYMK
        RGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  RGESKTPKRFINDTIRNDFHRKFLQKYMK

A0A1S3BL67 protein CWC15 homolog

4.1e-114

99.56

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
        RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQA

Query:  RGESKTPKRFINDTIRNDFHRKFLQKYMK
        RGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  RGESKTPKRFINDTIRNDFHRKFLQKYMK

A0A5D3CUA0 Protein CWC15-like protein

1.1e-111

93.85

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDE---------------SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS
        RIIPRSLDADDSDVDVKSDDE               SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS
Subjt:  RIIPRSLDADDSDVDVKSDDE---------------SDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFS

Query:  VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
        VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Subjt:  VKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1GEX7 protein CWC15 homolog isoform X2

1.9e-111

97.83

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSD+ESDDD DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK
        ARGE+KTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK

A0A6J1KV80 protein CWC15 homolog isoform X2

1.9e-111

97.83

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ
        RIIPRSLDADDSDVDVKSD+ESDDD DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP+SFSVKRRWDDDVVFKNQ
Subjt:  RIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQ

Query:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK
        ARGE+KTPKRFINDTIRNDFHRKFL KYMK
Subjt:  ARGESKTPKRFINDTIRNDFHRKFLQKYMK

SwissProt top hits

e value

%identity

Alignment

Q0VFP5 Protein CWC15 homolog

1.1e-42

49.15

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    R+H           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPSSFSVKRRWDDDVV
        +I   +LDADD   D  +DD+SD+D D   DDT ALLAELE+IKKERAEE+ RKE +++ EE +++   +L GNPLLN     +  ++F VKRRWDDDVV
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN-----EQPSSFSVKRRWDDDVV

Query:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK
        FKN A+G  E K  KRF+NDT+R++FH+KF++KY+K
Subjt:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK

Q2KJD3 Spliceosome-associated protein CWC15 homolog

1.8e-42

49.15

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    R+H   S +     K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVV
        +I   +LDADD   D + +DE D +++ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP ++F VKRRWDDDVV
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVV

Query:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK
        FKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK

Q6DKE6 Protein CWC15 homolog B

5.3e-42

47.7

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G + +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    R+H           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDV
        +I   +LDADD   D  +D++SD+D D   DDT ALLAELE+IKKERAEE++RKE +++ EE +++   +L GNPLLN      +  +SF VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDV

Query:  VFKNQARG----ESKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G    + +  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG----ESKTPKRFINDTIRNDFHRKFLQKYMK

Q6NUB2 Protein CWC15 homolog A

4.1e-42

49.37

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    R+H           K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDV
        +I   +LDADD   D   D++SD+D D   DDT ALLAELE+IKKERAEEK RKE +++ EE +++   +L GNPLLN      +  +SF VKRRWDDDV
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN------EQPSSFSVKRRWDDDV

Query:  VFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK
        VFKN A+G  E K  KRF+NDT+R++FH+KF++KY+K
Subjt:  VFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK

Q9P013 Spliceosome-associated protein CWC15 homolog

2.0e-41

48.31

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Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED
        MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R ELE+RER     KN+    R+H   S +     K+   D
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIED

Query:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVV
        +I   +LDADD   D   +++ D +++ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN     QP ++F VKRRWDDDVV
Subjt:  RIIPRSLDADDSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN----EQP-SSFSVKRRWDDDVV

Query:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK
        FKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Subjt:  FKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK

Arabidopsis top hits

e value

%identity

Alignment

AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein

1.0e-93

81.39

Show/hide

Query:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIE
        MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+A+HTTLKPR+EGQ T +ELQ+ NLRDELE+RERRHFSSK+KSY DDRD R+GSQLLLE  KRD E
Subjt:  MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIE

Query:  DRIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKN
        +RIIPRS+DADDSDVD+KSDD+SDD+ DDDDEDDTEAL+AEL+QIKKER EE+LRKE++++ EEL  KE ELL+GNPLLN  P+SFSVKRRWDDDVVFKN
Subjt:  DRIIPRSLDADDSDVDVKSDDESDDD-DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKN

Query:  QARGESKTPKRFINDTIRNDFHRKFLQKYMK
        QARGE K PKRFINDTIRNDFHRKFL +YMK
Subjt:  QARGESKTPKRFINDTIRNDFHRKFLQKYMK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAACGAGCAAGGTGGTACTCGAATTTTCGGCCCATCGCAGAAATATTCGTCCAGAGACATCGCTTC
TCATACGACCTTGAAACCCAGAAAGGAAGGACAAGATACCCATGACGAATTGCAGAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAA
AAAACAAGTCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTATTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATCATACCACGAAGTTTAGACGCCGAC
GATTCTGATGTGGATGTCAAAAGTGATGATGAGAGTGATGACGACGACGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAG
AGCAGAGGAAAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAATTACTTCGAGGAAATCCACTGCTTAATGAGCAGCCCTCCTCTT
TTAGCGTCAAAAGAAGATGGGACGATGATGTTGTGTTCAAGAATCAGGCTCGTGGTGAATCAAAGACTCCTAAGCGCTTTATAAATGATACAATTAGGAACGACTTCCAC
CGGAAATTCTTGCAGAAGTACATGAAGTAA

mRNA sequence

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GAATTTTTTAGTCAGTGACCCGATTCGTAAGATAGTCTTAGAACAATCTTCCTCACCCACCAACGATTTTTCTCTTCCTTCGGCCTTCCAAATTCGCACACAGATCATCA
ATCAGTTTGAAATTAAACTTCTGAGCATTTGAAGGGTCGAGGCGACGAGGAAACAATTTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAA
CGAGCAAGGTGGTACTCGAATTTTCGGCCCATCGCAGAAATATTCGTCCAGAGACATCGCTTCTCATACGACCTTGAAACCCAGAAAGGAAGGACAAGATACCCATGACG
AATTGCAGAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAAAACAAGTCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTT
CTATTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATCATACCACGAAGTTTAGACGCCGACGATTCTGATGTGGATGTCAAAAGTGATGATGAGAGTGATGACGACGA
CGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCAGAGGAAAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGC
TTAAAGTCAAGGAAGCAGAATTACTTCGAGGAAATCCACTGCTTAATGAGCAGCCCTCCTCTTTTAGCGTCAAAAGAAGATGGGACGATGATGTTGTGTTCAAGAATCAG
GCTCGTGGTGAATCAAAGACTCCTAAGCGCTTTATAAATGATACAATTAGGAACGACTTCCACCGGAAATTCTTGCAGAAGTACATGAAGTAACATGGTTATCAACGAAT
TGGCTGATTCTTTTGTGCAAGCAGAAGTAGGCACATATTCTGTAGGCAAGGACCATGGCTAGGAGAATCCAGACCTCTTGTAAGCCACTGTTGAGGTCGACGGTGTCGAA
GGAAGAAGAAGTCTGCAGAGTTCTGCAGCCTTGTTTGGTTTGACATTCATATAACTGATCTCCTGAGTATTGCACTTTTAGAAGTAGTCTGAACCCATAATACATGAATG
ATATATATTTCATCCACCGCATGAACTTAGGTATATGCTGCCATAGGAAGAAGAAAACAGAAAAGATTCATATAAATCATTCAGTGGGGCCTTCTCTTCTTTTCCCCTTC
TTTAAACTATAATTAGGTTCTTAATAGGTTTTTAAATTTCTG

Protein sequence

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MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDAD
DSDVDVKSDDESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFH
RKFLQKYMK

PI0005538 (gene) of Melon (PI 482460) v1 genome