; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005583 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005583
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:17419434..17420236
RNA-Seq ExpressionPI0005583
SyntenyPI0005583
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035078.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-6454.98Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSGFGWN+E +CIIAE++LFDNWV+SHP AKGLL+K FPYYD+L+YVF RDRA G  AETFAD
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        +GSN P    D   + D   E+ P MYSQR+D+S DD+  +R SR+S+GR  SSGSKRK+G Q    VE I   +D  N+QLR I +WP    A +  + 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD
         E  + L ++PEL S DRV L R L   +DD
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD

KAA0044610.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-6454.98Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSGFGWN+E +CI+AE++LFDNWV+SHP AKGLL+K FPYYD+L+YVF RDRA G  AETFAD
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSN P    D   + D  +E+ P +YSQ VD+S DD+  +R SR+SDGR  SSGSKRK+G Q    +E I  A+D  N+QLR I +WP    A +  + 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD
         E  + L ++PEL S DR  L R LF  +DD
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.2e-6764.32Show/hide
Query:  EMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDENTPTMYSQRV
        EMRGPSCSGFGWNEE+QCIIAERDLFD+WVKSHP  KGLLHKSFPYYDDLSYVF +DRA GAR+ETF DVGSNVPN FND++PL D HDE+ PTMYSQ V
Subjt:  EMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDENTPTMYSQRV

Query:  DMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELHAEVVKQLDDIPELWSRDRVKLLRILFRSVD
         +SPD+M G RA                         EVIR+ ++F N+QL+AI DW KEK A E+E+ A+VVKQL DIPEL S+ R KL++ILFRS++
Subjt:  DMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELHAEVVKQLDDIPELWSRDRVKLLRILFRSVD

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-6455.41Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MAKKLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSGFGWN+E +CI+AE++LFDNWV+SHP AKGLL+KSFPYYD+L+YVF RDRA G  AETFAD
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSN P    D   + D  +E+ P +YSQ VD+S DD+  +R SR+S+GR  SSGSKRK+G Q    VE I  A+D  N+QLR IV+WP    A +  + 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD
         +  + L ++PEL S DR  L R L   +DD
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.3e-9172.61Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVF +DRA GAR+ETF +
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSNV N FND++PL D HDE+ PTMYSQ V MSPD+M G RA ++S+ RN SS SKRK+G +  ETVEVIR+ ++F N+QL+AI DWPKEK A EVE+ 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD
        A+VVKQL DIP+L S+DR KL++ILFRS++
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859536.1e-9272.61Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVF +DRA GAR+ETF +
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSNV N FND++PL D HDE+ PTMYSQ V MSPD+M G RA ++S+ RN SS SKRK+G +  ETVEVIR+ ++F N+QL+AI DWPKEK A EVE+ 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD
        A+VVKQL DIP+L S+DR KL++ILFRS++
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD

A0A5A7TN44 Retrotransposon protein1.1e-6454.98Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSGFGWN+E +CI+AE++LFDNWV+SHP AKGLL+K FPYYD+L+YVF RDRA G  AETFAD
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSN P    D   + D  +E+ P +YSQ VD+S DD+  +R SR+SDGR  SSGSKRK+G Q    +E I  A+D  N+QLR I +WP    A +  + 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD
         E  + L ++PEL S DR  L R LF  +DD
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD

A0A5A7U0H7 Retrotransposon protein6.1e-9272.61Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MA+KLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCIIAERDLFD+W+KSHP AKGLLHKSFPYYDDLSYVF +DRA GAR+ETF +
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSNV N FND++PL D HDE+ PTMYSQ V MSPD+M G RA ++S+ RN SS SKRK+G +  ETVEVIR+ ++F N+QL+AI DWPKEK A EVE+ 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD
        A+VVKQL DIP+L S+DR KL++ILFRS++
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVD

A0A5A7V6Q9 Retrotransposon protein6.3e-6555.41Show/hide
Query:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD
        MAKKLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSGFGWN+E +CI+AE++LFDNWV+SHP AKGLL+KSFPYYD+L+YVF RDRA G  AETFAD
Subjt:  MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFAD

Query:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH
        VGSN P    D   + D  +E+ P +YSQ VD+S DD+  +R SR+S+GR  SSGSKRK+G Q    VE I  A+D  N+QLR IV+WP    A +  + 
Subjt:  VGSNVPNSFNDSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELH

Query:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD
         +  + L ++PEL S DR  L R L   +DD
Subjt:  AEVVKQLDDIPELWSRDRVKLLRILFRSVDD

A0A5D3DG22 Retrotransposon protein4.0e-6764.32Show/hide
Query:  EMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDENTPTMYSQRV
        EMRGPSCSGFGWNEE+QCIIAERDLFD+WVKSHP  KGLLHKSFPYYDDLSYVF +DRA GAR+ETF DVGSNVPN FND++PL D HDE+ PTMYSQ V
Subjt:  EMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFADVGSNVPNSFNDSVPLDDLHDENTPTMYSQRV

Query:  DMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELHAEVVKQLDDIPELWSRDRVKLLRILFRSVD
         +SPD+M G RA                         EVIR+ ++F N+QL+AI DW KEK A E+E+ A+VVKQL DIPEL S+ R KL++ILFRS++
Subjt:  DMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELHAEVVKQLDDIPELWSRDRVKLLRILFRSVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein2.1e-0439.13Show/hide
Query:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF
        GF W+E    I A+  ++D+++K HP A+    KS P Y+DL  +F
Subjt:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF

AT2G24960.2 unknown protein3.3e-0527.78Show/hide
Query:  SGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIG
        +GF W+     +IA+ D+++ ++++HP A+    K+ P Y +L ++F ++ + G
Subjt:  SGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIG

AT4G02210.1 unknown protein1.2e-0434.78Show/hide
Query:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF
        GF W++  Q ++A+  ++D ++K HP ++    KS P Y DL  V+
Subjt:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF

AT4G02210.2 unknown protein1.2e-0434.78Show/hide
Query:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF
        GF W++  Q ++A+  ++D ++K HP ++    KS P Y DL  V+
Subjt:  GFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAAAGTTGCCCGATACTAACATCCAAGGATCACCGACTATAGATTGTTGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATC
CTGTAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAAT
CATTTCCATATTATGACGATTTGTCATACGTGTTCGATAGAGATCGAGCAATAGGAGCACGTGCGGAGACATTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAAC
GACAGTGTTCCACTTGATGATCTCCATGACGAAAACACCCCGACGATGTATAGCCAAAGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAAGTCGATCAAG
TGATGGGCGGAACTATTCAAGTGGGAGTAAGAGGAAACAGGGTGGCCAACATAGTGAAACAGTGGAGGTGATCAGGAATGCAATAGATTTTGCAAATGATCAATTGAGGG
CCATTGTGGATTGGCCAAAGGAGAAATGTGCAACAGAGGTCGAATTGCATGCTGAAGTCGTGAAACAACTGGATGATATCCCTGAACTATGGAGTCGCGATAGGGTAAAA
CTTCTGCGAATATTATTCCGTAGTGTTGATGACAGGGATTCCTGTCGGTCCCATCGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAAAGTTGCCCGATACTAACATCCAAGGATCACCGACTATAGATTGTTGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATC
CTGTAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAATTGGGTCAAGAGTCATCCTGGGGCGAAAGGACTGTTACACAAAT
CATTTCCATATTATGACGATTTGTCATACGTGTTCGATAGAGATCGAGCAATAGGAGCACGTGCGGAGACATTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAAC
GACAGTGTTCCACTTGATGATCTCCATGACGAAAACACCCCGACGATGTATAGCCAAAGGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAAGTCGATCAAG
TGATGGGCGGAACTATTCAAGTGGGAGTAAGAGGAAACAGGGTGGCCAACATAGTGAAACAGTGGAGGTGATCAGGAATGCAATAGATTTTGCAAATGATCAATTGAGGG
CCATTGTGGATTGGCCAAAGGAGAAATGTGCAACAGAGGTCGAATTGCATGCTGAAGTCGTGAAACAACTGGATGATATCCCTGAACTATGGAGTCGCGATAGGGTAAAA
CTTCTGCGAATATTATTCCGTAGTGTTGATGACAGGGATTCCTGTCGGTCCCATCGAAACTGA
Protein sequenceShow/hide protein sequence
MAKKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNWVKSHPGAKGLLHKSFPYYDDLSYVFDRDRAIGARAETFADVGSNVPNSFN
DSVPLDDLHDENTPTMYSQRVDMSPDDMVGTRASRSSDGRNYSSGSKRKQGGQHSETVEVIRNAIDFANDQLRAIVDWPKEKCATEVELHAEVVKQLDDIPELWSRDRVK
LLRILFRSVDDRDSCRSHRN