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PI0005591 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005591
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag protease polyprotein
Genome locationchr10:7031367..7031732
RNA-Seq ExpressionPI0005591
SyntenyPI0005591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035974.1 hypothetical protein E6C27_scaffold56G001830 [Cucumis melo var. makuwa]2.2e-0744.55Show/hide
Query:  LVEATSRVEESLTKGKEVAITTRSKQEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNKCKEKTVIGEEQ-T
        LV+AT RVE+S+  G + A +  S +EEK SIE   K+ K+  S  S WSS +K    ECG++H G C++ SITCF+C K   Y+++ + K    EE+ T
Subjt:  LVEATSRVEESLTKGKEVAITTRSKQEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNKCKEKTVIGEEQ-T

Query:  KTEVASHIVQ
        +  VASH VQ
Subjt:  KTEVASHIVQ
KAA0068140.1 gag protease polyprotein [Cucumis melo var. makuwa]1.1e-1144.57Show/hide
Query:  LVEATSRVEESLTKGKEVAITTRSK-----QEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNK
        ++EA  RV+ +L + ++ +   +S      +EE++S+E S K+AKS F  GSRW+  QKP + ECG++H G C+QNSI CFKCG+VG +Q +
Subjt:  LVEATSRVEESLTKGKEVAITTRSK-----QEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNK
TrEMBL top hitse value%identityAlignment
A0A5D3DC62 Gag protease polyprotein5.4e-1244.57Show/hide
Query:  LVEATSRVEESLTKGKEVAITTRSK-----QEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNK
        ++EA  RV+ +L + ++ +   +S      +EE++S+E S K+AKS F  GSRW+  QKP + ECG++H G C+QNSI CFKCG+VG +Q +
Subjt:  LVEATSRVEESLTKGKEVAITTRSK-----QEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNK
A0A5D3E3Q3 Retrotrans_gag domain-containing protein1.0e-0744.55Show/hide
Query:  LVEATSRVEESLTKGKEVAITTRSKQEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNKCKEKTVIGEEQ-T
        LV+AT RVE+S+  G + A +  S +EEK SIE   K+ K+  S  S WSS +K    ECG++H G C++ SITCF+C K   Y+++ + K    EE+ T
Subjt:  LVEATSRVEESLTKGKEVAITTRSKQEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNKCKEKTVIGEEQ-T

Query:  KTEVASHIVQ
        +  VASH VQ
Subjt:  KTEVASHIVQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTGGAGGCAACGTCACGTGTGGAGGAGAGTTTAACAAAAGGAAAAGAAGTGGCAATCACTACGCGTAGTAAACAAGAAGAAAAGGAGAGTATAGAAAGGAGTTTGAA
GCGGGCTAAATCTGATTTTAGTCATGGTTCGCGTTGGAGTAGCAAACAGAAACCGAGCTATAAGGAATGTGGAAGGCAACACATAGGATTTTGCAAGCAAAATTCTATAA
CTTGCTTCAAATGTGGAAAAGTGGGTTGTTACCAGAATAAGTGTAAGGAAAAAACTGTGATAGGTGAAGAGCAGACCAAAACAGAAGTGGCTTCTCACATAGTTCAACAA
CCTACACAAGGTTCGATGAAAGACAAAGGTAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTGTGGAGGCAACGTCACGTGTGGAGGAGAGTTTAACAAAAGGAAAAGAAGTGGCAATCACTACGCGTAGTAAACAAGAAGAAAAGGAGAGTATAGAAAGGAGTTTGAA
GCGGGCTAAATCTGATTTTAGTCATGGTTCGCGTTGGAGTAGCAAACAGAAACCGAGCTATAAGGAATGTGGAAGGCAACACATAGGATTTTGCAAGCAAAATTCTATAA
CTTGCTTCAAATGTGGAAAAGTGGGTTGTTACCAGAATAAGTGTAAGGAAAAAACTGTGATAGGTGAAGAGCAGACCAAAACAGAAGTGGCTTCTCACATAGTTCAACAA
CCTACACAAGGTTCGATGAAAGACAAAGGTAAATGA
Protein sequenceShow/hide protein sequence
LVEATSRVEESLTKGKEVAITTRSKQEEKESIERSLKRAKSDFSHGSRWSSKQKPSYKECGRQHIGFCKQNSITCFKCGKVGCYQNKCKEKTVIGEEQTKTEVASHIVQQ
PTQGSMKDKGK