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PI0005600 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005600
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr03:24212667..24212987
RNA-Seq ExpressionPI0005600
SyntenyPI0005600
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0046593 - mandelonitrile lyase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG96384.1 ADP glucose pyrophosphorylase large subunit 1 [Prunus dulcis]2.6e-4183Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSFIQPAIP FDGHYDHWSMLMENFLRSKE+W LV+P Y+E AS S+QTDAQRKKND++KLKDLKVKNYLFQAIDRT+L+ ILKK+TAK+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

KAA0033402.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.6e-4182.08Show/hide
Query:  MTAEKNEGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWD
        MT E NEGSFIQP IP F+GH DHWSM MENFLRSKEYWELV+P YVE AS SLQT+AQRKKN EMKLKDLKVKNYLFQAIDRTILE IL KN  KEIWD
Subjt:  MTAEKNEGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWD

Query:  AMKKKY
        ++KKKY
Subjt:  AMKKKY

KAF8404908.1 hypothetical protein HHK36_009803 [Tetracentron sinense]6.9e-4285Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSFIQPAIP FDGHYDHWSMLMENFLRSKE+W LV+P Y+E AS S+QTDAQRKKNDEMKLKDLKVKNYLFQAIDRT+L+ ILKK+TAK+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

PNX85109.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense]5.3e-4284Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSF+QPAIP FDGHYDHWSMLMENFLRSKEYWEL++P YVE ASG + TDAQRKKNDEMKLKDLK KNYLFQAIDRT+LE ILKK+T+K+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

PNX96091.1 retrotransposon-related protein [Trifolium pratense]1.5e-4183Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSF+QPAIP FDGHYDHWSMLMENFLRSKEYWEL+ P +VE ASG+ QT+ QRKKNDEMKLKDLK KNYLFQAIDRT+L  ILKK+T+KEIWDAMKKKY
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

TrEMBL top hitse value%identityAlignment
A0A2K3M2V4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)2.6e-4284Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSF+QPAIP FDGHYDHWSMLMENFLRSKEYWEL++P YVE ASG + TDAQRKKNDEMKLKDLK KNYLFQAIDRT+LE ILKK+T+K+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

A0A2K3MZ63 Retrotransposon-related protein7.4e-4283Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSF+QPAIP FDGHYDHWSMLMENFLRSKEYWEL+ P +VE ASG+ QT+ QRKKNDEMKLKDLK KNYLFQAIDRT+L  ILKK+T+KEIWDAMKKKY
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

A0A2N9J8J5 Integrase catalytic domain-containing protein7.4e-4285Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSFIQPAIP FDGHYDHWSMLMENFLRSKE+WELV+P Y E AS S+QTDAQ+KKNDEMKLKDLKVKNYLFQAIDRT+L+ ILKK+TAK+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

A0A4Y1QX25 ADP glucose pyrophosphorylase large subunit 11.3e-4183Show/hide
Query:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY
        EGSFIQPAIP FDGHYDHWSMLMENFLRSKE+W LV+P Y+E AS S+QTDAQRKKND++KLKDLKVKNYLFQAIDRT+L+ ILKK+TAK+IWDAMKKK+
Subjt:  EGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY

A0A5A7SQE0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-4182.08Show/hide
Query:  MTAEKNEGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWD
        MT E NEGSFIQP IP F+GH DHWSM MENFLRSKEYWELV+P YVE AS SLQT+AQRKKN EMKLKDLKVKNYLFQAIDRTILE IL KN  KEIWD
Subjt:  MTAEKNEGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWD

Query:  AMKKKY
        ++KKKY
Subjt:  AMKKKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAGAAAAGAATGAAGGAAGTTTTATACAACCAGCCATTCCATGCTTTGATGGTCACTATGATCACTGGAGCATGTTGATGGAAAACTTTCTTCGATCCAAGGA
ATATTGGGAGTTGGTAAAACCTAGATATGTTGAACTAGCTAGCGGGTCATTGCAGACGGATGCTCAACGAAAGAAAAATGATGAAATGAAGTTGAAGGACTTGAAAGTGA
AAAATTATCTCTTCCAAGCCATTGATCGCACAATTCTGGAGAACATTCTCAAGAAAAATACTGCAAAAGAAATATGGGATGCTATGAAGAAAAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAGAAAAGAATGAAGGAAGTTTTATACAACCAGCCATTCCATGCTTTGATGGTCACTATGATCACTGGAGCATGTTGATGGAAAACTTTCTTCGATCCAAGGA
ATATTGGGAGTTGGTAAAACCTAGATATGTTGAACTAGCTAGCGGGTCATTGCAGACGGATGCTCAACGAAAGAAAAATGATGAAATGAAGTTGAAGGACTTGAAAGTGA
AAAATTATCTCTTCCAAGCCATTGATCGCACAATTCTGGAGAACATTCTCAAGAAAAATACTGCAAAAGAAATATGGGATGCTATGAAGAAAAAGTATTAA
Protein sequenceShow/hide protein sequence
MTAEKNEGSFIQPAIPCFDGHYDHWSMLMENFLRSKEYWELVKPRYVELASGSLQTDAQRKKNDEMKLKDLKVKNYLFQAIDRTILENILKKNTAKEIWDAMKKKY