; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005630 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005630
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationchr04:9728015..9731148
RNA-Seq ExpressionPI0005630
SyntenyPI0005630
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-20195.37Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR----GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR    GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR----GGGGGGGGGGYDGAGSAPSGRYHPYGR

KGN59707.1 hypothetical protein Csa_002190 [Cucumis sativus]2.1e-20597.92Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSGAYGDAYGEFGGGGYG  FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYAGSYDMGMGTGYAAGGRGSFYGSR  GGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]1.4e-20195.13Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR-----GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR     GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR-----GGGGGGGGGGYDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]1.8e-20195.36Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR   GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]8.2e-20295.62Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR   GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein1.0e-20597.92Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSGAYGDAYGEFGGGGYG  FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYAGSYDMGMGTGYAAGGRGSFYGSR  GGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 11.2e-20196.89Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYG  FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMGMGTGYAAGGRGSFYGSR     GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 11.2e-20196.89Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYG  FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMGMGTGYAAGGRGSFYGSR     GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 16.8e-20295.13Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR-----GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR     GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR-----GGGGGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 18.8e-20295.36Show/hide
Query:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEH+DAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYG GFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMG+GTGY +GGRGSFYGSR   GGGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSR---GGGGGGGGGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A12.3e-2936.34Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF  +G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY---
          +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      ++ G  G  +   
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY---

Query:  ------GEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG
              G F G G   G R GG YG  G GY G+ GND    G YG GG G        G S  YG S  +GY  +G GYGG   SY +YN+GG    GG
Subjt:  ------GEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG

Query:  YAGSYDMGMGTGYAAGGR-------------GSFYGSRGGGGGGGG---------GGYDGAGSAPS
         +GS + G G  Y   G              G+F G   G  GGGG         GGY G+ S+ S
Subjt:  YAGSYDMGMGTGYAAGGR-------------GSFYGSRGGGGGGGG---------GGYDGAGSAPS

P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog1.7e-2936.57Show/hide
Query:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK
        HG+     K+F+GGL   TT     +HF  +GEI D V+MKD KT   RGFGF+TY+   +VD       H ++G+ VE KR +P+      +     KK
Subjt:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK

Query:  IFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGA
        +FVGGI   ++E++ RD+F QYG V    I+ D  T + RGF F+ F+    VD +  + N  ++ G  +++KKA PK      AP  R    R    G 
Subjt:  IFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGA

Query:  YGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGY--------GGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGG
         G      GG G G G   G   G  GGG+GG         GG D  G G  G GG   +     MG   RYG    R     GG+     S   YNSG 
Subjt:  YGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGY--------GGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGG

Query:  APNTGGYAGSYDMGMGTGYAAGGRG---------SFYGSRGGGGGGGGGG
         P + G+ G Y    G G   G  G         S  GSRGGGGGG G G
Subjt:  APNTGGYAGSYDMGMGTGYAAGGRG---------SFYGSRGGGGGGGGGG

P51991 Heterogeneous nuclear ribonucleoprotein A35.6e-2837.29Show/hide
Query:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP
           KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP

Query:  SYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN
          SG +    G FGGG  G  F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG    YG  N G    
Subjt:  SYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN

Query:  TGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYG
         GGY G      G GY     G   G+ GGG  GGGG Y+  G+    +   YG
Subjt:  TGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYG

Q08473 RNA-binding protein squid4.6e-3034.65Show/hide
Query:  DVATNG---EHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKV-IEDT
        DV  +G   E+ DA      +  S +   + G      K+FVGGL  ETT  +   HFG YGEI    +  D +TG  RGF F+ + +   +DKV   D 
Subjt:  DVATNG---EHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKV-IEDT

Query:  HIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEI
        HIIN K+V+ K+   +           KIFVGG+ T + ++E + +F Q+G + E ++  D   S+ +GF FITF++EQ V DLL    + ++AG +V++
Subjt:  HIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEI

Query:  KKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGG-GGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG
        K+A PK  N      +     R    G      G +GG GGY   +   G YG  GGGYGGYG     GYG Y  GG                       
Subjt:  KKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGG-GGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG

Query:  YDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDG----AGSAPSGRYHPY
              Y G D  Y  Y  GG     GY G      G G   GGRG   G RGGGG  GGGG++G     G     R+ PY
Subjt:  YDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDG----AGSAPSGRYHPY

Q8W034 Heterogeneous nuclear ribonucleoprotein 11.4e-3936.98Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+    +G  GYGAG+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNTGGYAGSYDMGMGTGYAAG-----GRGSFYGSRGGGGGGGGGGYDGAGSAPSGRY
             GYG P    GA +S     G AP T   +G  + G G G  +G     G  + YG  GG   GGG    G+G    G Y
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNTGGYAGSYDMGMGTGYAAG-----GRGSFYGSRGGGGGGGGGGYDGAGSAPSGRY

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-5041.31Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG +GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA
        G+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E+   QVEIK+AEPK+     +     +   +D   SYSG 
Subjt:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA

Query:  YGDAYGEFGG-GGYGAGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNTG-
          + Y  + G GGY              GGYG Y GN   +  G YG GG                      GY +  GYGG   + G Y +GG  + G 
Subjt:  YGDAYGEFGG-GGYGAGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNTG-

Query:  GYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPY
        GY      G+    A GG  S      G   G G G +G+G     RYHPY
Subjt:  GYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-6967.78Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-8254.37Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGAYGDAYGEFGG--GGYG---AGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES
         S + +Y    G +GG  GGYG      R+ GGP     GGYG   G  G +F  GY  YG G +G YR +P +GYS+R+G  +  G+   G   G + +
Subjt:  PSYSGAYGDAYGEFGG--GGYG---AGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES

Query:  YGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR
        Y  Y  GG    GGY G    G G  Y +GG G   GS  G GG  G GY     + S RYHPY R
Subjt:  YGAYNSGGAPNTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-4036.98Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+    +G  GYGAG+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNTGGYAGSYDMGMGTGYAAG-----GRGSFYGSRGGGGGGGGGGYDGAGSAPSGRY
             GYG P    GA +S     G AP T   +G  + G G G  +G     G  + YG  GG   GGG    G+G    G Y
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNTGGYAGSYDMGMGTGYAAG-----GRGSFYGSRGGGGGGGGGGYDGAGSAPSGRY

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-10658.78Show/hide
Query:  MDSKPNDVATNGEHDDAKPLNH-KDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    +     E  D KP    +DD  +  P S G   SAGKIFVGGL RETTSA+F+KHFG YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDVATNGEHDDAKPLNH-KDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ
        +D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E++G+Q
Subjt:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ

Query:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GAGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY
        VEIKKAEPKK N    PSKR+ DSR ++ G YGD YG   GGGY   G  +++GG Y G R GGYGGYGG +F GYG  G  GG+G YR +P++GYS RY
Subjt:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GAGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY

Query:  ---GASFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDMGMGTGYAAGGRGSFYGSRGG--
           G  ++R GY                        GGYGGP  SY         G Y  G G    GGY   G YDMG   G  AGG G+  G  GG  
Subjt:  ---GASFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDMGMGTGYAAGGRGSFYGSRGG--

Query:  --GGGGGGGGYDGAGSAPSGRYHPYGR
          GGGGG GGY G G   SGRYHPYGR
Subjt:  --GGGGGGGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGATGTTGCCACTAATGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCC
ATCTCATGGCGACGGAGCCAGTGCTGGGAAAATCTTTGTTGGTGGTTTACCGCGGGAAACGACTTCTGCGCAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGCAAACAAGTGGAAATCAAGCGAACGATACCCAAAGGATCCTCCAGCTCTCGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGTATTCCTACATCTGTAGATGA
AGACGAGTTCAGAGATTTTTTTATGCAATATGGCGAGGTTAAGGAACACCAGATTATGCGCGACCACTCCACCAGTCGATCTCGTGGGTTTGGTTTTATTACATTCGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGGAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCC
CCTTCAAAGAGATACCATGATTCTAGGCCAAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTCGGAGGTGGTGGGTATGGTGCCGGTTTCAGGGCAGGTGGACC
ATATGGTGCCAGAGGTGGTGGATATGGTGGATATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACCGGGAAGACCCCTCCATGG
GTTACTCTGCTCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAAT
ACTGGTGGGTATGCAGGTAGCTATGATATGGGCATGGGCACTGGATATGCTGCTGGTGGTAGAGGCTCTTTCTATGGAAGTAGAGGAGGTGGAGGTGGAGGAGGAGGAGG
AGGATACGATGGTGCAGGAAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
mRNA sequenceShow/hide mRNA sequence
CAGGTCTGGAGGTTGTGGCGAATTGCGAAATTGCGATTTCTAGGGTTTAAGGGGGGCGCCAATTTTTCCGTACTCGCCGGTGCGAACCAACAGCAGCTCACACATGTCCT
CTAGGGCTTAGCCATCTCCCTCGCTCCTTTGTCTTTACCCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTAATGTCGGAAAACTCCATGGATTCCAAGCCAAA
TGATGTTGCCACTAATGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCCATCTCATGGCGACGGAGCCAGTGCTGGGAAAA
TCTTTGTTGGTGGTTTACCGCGGGAAACGACTTCTGCGCAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGGACTCTGTTATAATGAAGGACCGGAAGACTGGA
CATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGCAAACAAGTGGAAATCAAGCGAACGAT
ACCCAAAGGATCCTCCAGCTCTCGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGTATTCCTACATCTGTAGATGAAGACGAGTTCAGAGATTTTTTTATGCAATATG
GCGAGGTTAAGGAACACCAGATTATGCGCGACCACTCCACCAGTCGATCTCGTGGGTTTGGTTTTATTACATTCGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAAT
GGGAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCCCCTTCAAAGAGATACCATGATTCTAGGCCAAG
TTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTCGGAGGTGGTGGGTATGGTGCCGGTTTCAGGGCAGGTGGACCATATGGTGCCAGAGGTGGTGGATATGGTGGAT
ATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACCGGGAAGACCCCTCCATGGGTTACTCTGCTCGTTATGGAGCAAGCTTCAGT
AGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTATGATATGGG
CATGGGCACTGGATATGCTGCTGGTGGTAGAGGCTCTTTCTATGGAAGTAGAGGAGGTGGAGGTGGAGGAGGAGGAGGAGGATACGATGGTGCAGGAAGTGCTCCAAGTG
GTCGATATCATCCTTATGGACGGTAGTAACTAGCGGCGGGGGGAGCTTTTGTTAATTGATGTGCTACAAGGACGGCAATGCTGAGAAGTCCCTGGTCCTCAAAATAATGA
TAAATATGTGTGCCTCTTACCGTCACAAGATTCCTGCCATGTTCATCAGGATCACAATTTTCAGAGATTTAGAATTTGACTGTACAATTGATTGTGACTAACTTGCTCGA
GATTATGCTAAGATTATGTATCACCTATATATGCCATTAATTTTTCCATTTTGCTACCAACTTTTACGTTGTTTTAGTGACATCGTTATTTTGAAGAATGTTTAATGAAT
TGCAAATTTTCAGTTTCCTTCTA
Protein sequenceShow/hide protein sequence
MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA
PSKRYHDSRPSYSGAYGDAYGEFGGGGYGAGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN
TGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGGGYDGAGSAPSGRYHPYGR