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PI0005644 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005644
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPol protein
Genome locationchr03:10993534..10993773
RNA-Seq ExpressionPI0005644
SyntenyPI0005644
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037901.1 pol protein [Cucumis melo var. makuwa]2.4e-3184.81Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSY E PVE+LA+E+KTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
KAA0043066.1 pol protein [Cucumis melo var. makuwa]1.8e-3186.08Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+E+KTLRN+EI LVKVLWRNHRVEE TWEREDDMR RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
KAA0045469.1 pol protein [Cucumis melo var. makuwa]1.8e-3187.18Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+EMKTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFE
KAA0059963.1 pol protein [Cucumis melo var. makuwa]2.4e-3184.81Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSY E PVE+L +EMKTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
KAA0068212.1 pol protein [Cucumis melo var. makuwa]4.8e-3286.08Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+E+KTLRN+EI+LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
TrEMBL top hitse value%identityAlignment
A0A5A7T8G8 Reverse transcriptase1.2e-3184.81Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSY E PVE+LA+E+KTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
A0A5A7TGS7 Reverse transcriptase1.2e-3184.81Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSY E PVE+LA+E+KTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
A0A5A7TM23 Pol protein8.8e-3286.08Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+E+KTLRN+EI LVKVLWRNHRVEE TWEREDDMR RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
A0A5A7TW62 Pol protein8.8e-3287.18Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFE
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+EMKTLRN+EI LVKVLWRNHRVEE TWEREDDMR+RYPELFE
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFE
A0A5A7VIQ0 Pol protein2.3e-3286.08Show/hide
Query:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
        MLRKYV DPSHV+DYEPL IDENLSYVE PVE+LA+E+KTLRN+EI+LVKVLWRNHRVEE TWEREDDMR+RYPELFEG
Subjt:  MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGAAATACGTGGCTGACCCGTCTCATGTTTTGGATTATGAACCTTTGGCGATTGATGAGAATTTGAGCTACGTGGAGCATCCAGTTGAGATTTTGGCCAAGGA
AATGAAGACGCTTCGTAACCGGGAGATTGCCTTAGTGAAGGTCCTTTGGCGCAACCACCGAGTTGAAGAGGTCACTTGGGAGCGGGAGGATGACATGAGAGCTCGTTACC
CAGAGTTGTTCGAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGAAATACGTGGCTGACCCGTCTCATGTTTTGGATTATGAACCTTTGGCGATTGATGAGAATTTGAGCTACGTGGAGCATCCAGTTGAGATTTTGGCCAAGGA
AATGAAGACGCTTCGTAACCGGGAGATTGCCTTAGTGAAGGTCCTTTGGCGCAACCACCGAGTTGAAGAGGTCACTTGGGAGCGGGAGGATGACATGAGAGCTCGTTACC
CAGAGTTGTTCGAGGGTTAG
Protein sequenceShow/hide protein sequence
MLRKYVADPSHVLDYEPLAIDENLSYVEHPVEILAKEMKTLRNREIALVKVLWRNHRVEEVTWEREDDMRARYPELFEG