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PI0005648 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005648
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:3526675..3527478
RNA-Seq ExpressionPI0005648
SyntenyPI0005648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025264.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.4e-1645.07Show/hide
Query:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS
        PLPSLDA ++EIL EEKRLG+VS++  D ALAITH      +  CKNC                                     ++ + K S ++GS S
Subjt:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS

Query:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        VVVAATPS   PP  LQ++DL DLLKQV+SSNS AL VT GT
Subjt:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT

KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

TYK07403.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.4e-1645.07Show/hide
Query:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS
        PLPSLDA ++EIL EEKRLG+VS++  D ALAITH      +  CKNC                                     ++ + K S ++GS S
Subjt:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS

Query:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        VVVAATPS   PP  LQ++DL DLLKQV+SSNS AL VT GT
Subjt:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT

TrEMBL top hitse value%identityAlignment
A0A5A7SI05 Putative mitochondrial protein2.1e-1645.07Show/hide
Query:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS
        PLPSLDA ++EIL EEKRLG+VS++  D ALAITH      +  CKNC                                     ++ + K S ++GS S
Subjt:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS

Query:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        VVVAATPS   PP  LQ++DL DLLKQV+SSNS AL VT GT
Subjt:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT

A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

A0A5D3C669 Putative mitochondrial protein2.1e-1645.07Show/hide
Query:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS
        PLPSLDA ++EIL EEKRLG+VS++  D ALAITH      +  CKNC                                     ++ + K S ++GS S
Subjt:  PLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGSSS

Query:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        VVVAATPS   PP  LQ++DL DLLKQV+SSNS AL VT GT
Subjt:  VVVAATPSS-NPP--LQISDLQDLLKQVLSSNSYALIVTAGT

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-1643.36Show/hide
Query:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS
        + PLPSLDA ++EILFEEKRLG+VSS+  D ALA TH   + ++ FCKNC                                     ++ + K S ++GS
Subjt:  KGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNC-------------------------------------YTPRSKSSPRSGS

Query:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT
        SSVV AAT     P  LQ++DL DLLKQV+SS S AL VT GT
Subjt:  SSVVVAATPSSNPP--LQISDLQDLLKQVLSSNSYALIVTAGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATCGTAACCGAGGACATCATCAAATCTGTCAAAGGTGCCACCGAGGAAAAGGTCCGTTGCCATCACTCGATGCTGTGATTCGGGAGATTCTGTTTGAGGAGAA
AAGACTTGGCCTAGTGTCCTCCATGTCTTTTGATGCTGCACTAGCAATCACGCATTCCCATCCTTCAACTGACTCACCCTTTTGCAAAAATTGTTACACCCCAAGGTCGA
AAAGCTCCCCTCGTTCTGGCTCTTCCTCTGTTGTTGTAGCTGCTACACCATCTTCCAATCCACCTCTTCAGATTAGTGATTTGCAGGATCTCCTTAAACAAGTGCTCTCT
TCCAATTCCTATGCTCTTATCGTCACAGCAGGTACCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATCGTAACCGAGGACATCATCAAATCTGTCAAAGGTGCCACCGAGGAAAAGGTCCGTTGCCATCACTCGATGCTGTGATTCGGGAGATTCTGTTTGAGGAGAA
AAGACTTGGCCTAGTGTCCTCCATGTCTTTTGATGCTGCACTAGCAATCACGCATTCCCATCCTTCAACTGACTCACCCTTTTGCAAAAATTGTTACACCCCAAGGTCGA
AAAGCTCCCCTCGTTCTGGCTCTTCCTCTGTTGTTGTAGCTGCTACACCATCTTCCAATCCACCTCTTCAGATTAGTGATTTGCAGGATCTCCTTAAACAAGTGCTCTCT
TCCAATTCCTATGCTCTTATCGTCACAGCAGGTACCTTTTGA
Protein sequenceShow/hide protein sequence
MVNRNRGHHQICQRCHRGKGPLPSLDAVIREILFEEKRLGLVSSMSFDAALAITHSHPSTDSPFCKNCYTPRSKSSPRSGSSSVVVAATPSSNPPLQISDLQDLLKQVLS
SNSYALIVTAGTF