; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005656 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005656
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:22015048..22015338
RNA-Seq ExpressionPI0005656
SyntenyPI0005656
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]3.4e-1258.73Show/hide
Query:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG
        NRA    ++SSNPH ++ QN+EES+F+ F  R+ DH MP   T+DK+FGIERLKA GA TFEG
Subjt:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]1.0e-1359.7Show/hide
Query:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL
        S NRA  LDEMSSNPH  I QN+EES+FN F  RVADH++P    ++K+  IER+KA GAT FEG +
Subjt:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL

KAE8648186.1 hypothetical protein Csa_018470 [Cucumis sativus]5.4e-1060.32Show/hide
Query:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG
        NRA E DEMSSNPH  I QN EES+F+ F  R  DH +     +DK+F IERLKA  ATTFEG
Subjt:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG

TYJ97632.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-0950.72Show/hide
Query:  RGRPSTNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG
        +G  + +R  E DEMS N H  + QN+ ES+F+ FT ++ DH MP+  T+ K+FGIERLKA  A TFEG
Subjt:  RGRPSTNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]2.8e-1461.19Show/hide
Query:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL
        S NRA  LDEMSSNPH  I QN+EES+FN F  RVADH++P    ++K+  IER+KA GATTFEG +
Subjt:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein1.6e-1258.73Show/hide
Query:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG
        NRA    ++SSNPH ++ QN+EES+F+ F  R+ DH MP   T+DK+FGIERLKA GA TFEG
Subjt:  NRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG

A0A5A7UFQ1 Uncharacterized protein5.1e-1459.7Show/hide
Query:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL
        S NRA  LDEMSSNPH  I QN+EES+FN F  RVADH++P    ++K+  IER+KA GAT FEG +
Subjt:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL

A0A5D3BCS9 Gag/pol protein5.8e-1050.72Show/hide
Query:  RGRPSTNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG
        +G  + +R  E DEMS N H  + QN+ ES+F+ FT ++ DH MP+  T+ K+FGIERLKA  A TFEG
Subjt:  RGRPSTNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEG

A0A5D3BUF6 Uncharacterized protein1.3e-0951.56Show/hide
Query:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFE
        S N+  E +E+S+NP+  I+QN E+S+F+ F  R+ DH MP+   +DK+F IERL+A GATTFE
Subjt:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFE

A0A5D3DVY7 Uncharacterized protein1.3e-1461.19Show/hide
Query:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL
        S NRA  LDEMSSNPH  I QN+EES+FN F  RVADH++P    ++K+  IER+KA GATTFEG +
Subjt:  STNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACGAGGAAGGCCAAGCACTAATAGAGCGCCTGAATTGGATGAAATGTCTAGTAATCCTCATGTTGCGATCGAGCAAAACATAGAAGAAAGTTTGTTCAATCA
TTTTACCCATAGAGTGGCAGATCATATTATGCCATCAAACCCTACATTAGATAAACAATTTGGAATTGAAAGGCTAAAGGCATTTGGAGCAACGACCTTCGAAGGACCAC
TAATTTGGCCAACACGGAGAAGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACGAGGAAGGCCAAGCACTAATAGAGCGCCTGAATTGGATGAAATGTCTAGTAATCCTCATGTTGCGATCGAGCAAAACATAGAAGAAAGTTTGTTCAATCA
TTTTACCCATAGAGTGGCAGATCATATTATGCCATCAAACCCTACATTAGATAAACAATTTGGAATTGAAAGGCTAAAGGCATTTGGAGCAACGACCTTCGAAGGACCAC
TAATTTGGCCAACACGGAGAAGTGGTTGA
Protein sequenceShow/hide protein sequence
MAPRGRPSTNRAPELDEMSSNPHVAIEQNIEESLFNHFTHRVADHIMPSNPTLDKQFGIERLKAFGATTFEGPLIWPTRRSG