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PI0005660 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005660
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type domain-containing protein
Genome locationchr07:22071559..22072094
RNA-Seq ExpressionPI0005660
SyntenyPI0005660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]3.4e-7794.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPES SPP LHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG EDVEAAMAEERRMKRAEK  LPP V+FGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]3.4e-7794.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPES SPP LHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG EDVEAAMAEERRMKRAEK  LPP V+FGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]1.9e-6481.01Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPP-ALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE
        M DPLLTLLFPMETMV ES SPP  +HYTVTLDLRTS+IFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK+P  VRFGSE
Subjt:  MGDPLLTLLFPMETMVPESPSPP-ALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]6.6e-6581.65Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPAL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE
        M DPLLTLLFPMETMV ES SPP + HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK+P  VRFGSE
Subjt:  MGDPLLTLLFPMETMVPESPSPPAL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]2.3e-7894.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPESPSPP LHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGGGEDVEAAMAEERR+KRAEK  LPP VRFGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPEC+HFFHSECIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein1.1e-7894.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPESPSPP LHYTVTLD+RTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRR+GGGGEDVEAAMAEERR+KRAEK  LPP VRFGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFL GENCQALPEC+HFFHSECIDVWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

A0A1S3BVC7 RING-H2 finger protein ATL39-like1.6e-7794.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPES SPP LHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG EDVEAAMAEERRMKRAEK  LPP V+FGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

A0A5A7VAT0 RING-H2 finger protein ATL39-like1.6e-7794.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPES SPP LHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG EDVEAAMAEERRMKRAEK  LPP V+FGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

A0A5D3D9M0 RING-H2 finger protein ATL39-like1.6e-7794.34Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS
        MGDPLLTLLFPMETMVPES SPP LHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGG EDVEAAMAEERRMKRAEK  LPP V+FGS
Subjt:  MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEK--LPPKVRFGS

Query:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        EKMVRRRSEEECAICLEEFLAGENCQALPEC HFFHSECI+VWFSKKFTCPICRNCVAA
Subjt:  EKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

A0A6J1IG67 RING-H2 finger protein ATL39-like3.2e-6581.65Show/hide
Query:  MGDPLLTLLFPMETMVPESPSPPAL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE
        M DPLLTLLFPMETMV ES SPP + HYTVTLDLRTSIIFS +IILFFLFL+HVLSGFLQWFL  RR G    DVEA M EERR++RAEK+P  VRFGSE
Subjt:  MGDPLLTLLFPMETMVPESPSPPAL-HYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSE

Query:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        +MVRRRSEEECAICLEEF+AGENCQALPEC+HFFHS+CIDVWFSKKFTCPICR+C+AA
Subjt:  KMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL101.1e-1145.07Show/hide
Query:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        K+A ++ P V + S +M     +EEC ICL +F++GE  + LP+C+H FH  CID W  +  TCP CRNC+
Subjt:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

P0C035 RING-H2 finger protein ATL605.7e-1148.98Show/hide
Query:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP C+H FH +CID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

Q6NML0 E3 ubiquitin-protein ligase ATL761.6e-1043.66Show/hide
Query:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        K+A ++ P V + S +M      EEC ICL +F++GE  + LP+C+H FH  CID W     TCP CR+C+
Subjt:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

Q9LS99 RING-H2 finger protein ATL771.5e-1145.07Show/hide
Query:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        K+A K+ P V +  E  +     EEC ICL +F+AGE  + LP+C+H FH  CID W ++  TCP CR+C+
Subjt:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

Q9XF63 RING-H2 finger protein ATL31.1e-1157.45Show/hide
Query:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+C+H FH ECID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein8.1e-1345.07Show/hide
Query:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        K+A ++ P V + S +M     +EEC ICL +F++GE  + LP+C+H FH  CID W  +  TCP CRNC+
Subjt:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

AT1G53820.1 RING/U-box superfamily protein4.0e-1248.98Show/hide
Query:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA
        ECA+CL + + G+  + LP C+H FH +CID+WF    TCP+CRN V +
Subjt:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA

AT1G72310.1 RING/U-box superfamily protein8.1e-1357.45Show/hide
Query:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        EC+ICL E + G+  + LP+C+H FH ECID+WF    TCPICRN V
Subjt:  ECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

AT3G18773.1 RING/U-box superfamily protein1.1e-1245.07Show/hide
Query:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV
        K+A K+ P V +  E  +     EEC ICL +F+AGE  + LP+C+H FH  CID W ++  TCP CR+C+
Subjt:  KRAEKLPPKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCV

AT5G53110.1 RING/U-box superfamily protein4.0e-1241.94Show/hide
Query:  PKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRN
        PK+  G  K + +  +  CAICL E+   E  + +P+C H FH++CID W     TCP+CRN
Subjt:  PKVRFGSEKMVRRRSEEECAICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCCATTACTGACACTCCTATTCCCCATGGAAACCATGGTCCCTGAATCTCCATCTCCTCCAGCCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCAT
TATCTTCTCTTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGTCCTCAGCGGCTTCCTCCAGTGGTTCCTGGACGTCAGGCGAAGCGGAGGAGGCGGTGAAGACG
TGGAGGCGGCAATGGCAGAGGAGCGGAGGATGAAGCGGGCGGAGAAGTTGCCGCCAAAGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGC
GCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTGCCGGAGTGTGATCATTTTTTTCATTCGGAGTGTATTGATGTATGGTTTAGCAAGAAATTTAC
GTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
TCTTCACCAACAAAAATCCTCATCCTCCATAGCCAACAAAGAAACTTAAAAGCTTCACAACAATGGGAGATCCATTACTGACACTCCTATTCCCCATGGAAACCATGGTC
CCTGAATCTCCATCTCCTCCAGCCCTCCACTACACCGTAACCCTAGACCTCCGAACCTCCATTATCTTCTCTTTCTCCATAATCCTCTTCTTCCTCTTCCTCTTCCACGT
CCTCAGCGGCTTCCTCCAGTGGTTCCTGGACGTCAGGCGAAGCGGAGGAGGCGGTGAAGACGTGGAGGCGGCAATGGCAGAGGAGCGGAGGATGAAGCGGGCGGAGAAGT
TGCCGCCAAAGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGTGAGGAGGAATGCGCGATATGTTTGGAGGAGTTTTTGGCCGGAGAAAATTGTCAGGCGTTG
CCGGAGTGTGATCATTTTTTTCATTCGGAGTGTATTGATGTATGGTTTAGCAAGAAATTTACGTGCCCTATCTGCCGTAATTGTGTTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MGDPLLTLLFPMETMVPESPSPPALHYTVTLDLRTSIIFSFSIILFFLFLFHVLSGFLQWFLDVRRSGGGGEDVEAAMAEERRMKRAEKLPPKVRFGSEKMVRRRSEEEC
AICLEEFLAGENCQALPECDHFFHSECIDVWFSKKFTCPICRNCVAA