CuGenDBv2

Gene ID	PI0005663
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	embryo defective 3006
Genome location	chr07:5801043..5805899
RNA-Seq Expression	PI0005663
Synteny	PI0005663
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]

1.8e-85

91.8

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        MGKKHEIDTP++S Q DLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN
        YSKKTNIVEISNFLS  K EEIQHLKDMLKTAEEQN VI+GRIDVLRKGVQDASGM DAVKKLR+ CRSYG DGVNET DILN
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN

XP_011653244.1 uncharacterized protein LOC101212745 [Cucumis sativus]

7.4e-76

91.52

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        MG+KHE+D P+SS Q DLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRN
        YSKKTNIVEI NFLS TKKEEIQHLKDMLKTAEEQNWVI+GRID LRKGVQDASGM DAVKKLRN
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRN

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

2.3e-77

85.96

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        M KKHEI TP+SSSQ DLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET
        YSKKTNI+EI+N+LS TKK EIQHLKDMLKTAEEQN  ++GRID+LRKGVQDAS M DAV+KLRN CR+Y  DGV+ T
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]

4.3e-76

84.83

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        M KKHEI TP+SSSQ DLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET+VGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET
        YSKKTNI+EI+N+LS TKK EIQHLKDMLKTAEEQN  ++GRID+LRKGVQDAS M DAV+KLRN CR+Y  DGV+ T
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]

6.4e-80

87.78

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        M KK EIDTP+SSSQ DLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQ+LDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFD
        YSKKTNI+EI+NFLS TKK EIQHLKDMLKTAEEQN +I+GRIDVLRKGVQDAS M DAVKKLR  CR+YG DGVNETFD
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV94 Uncharacterized protein

3.6e-76

91.52

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        MG+KHE+D P+SS Q DLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLV DNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRN
        YSKKTNIVEI NFLS TKKEEIQHLKDMLKTAEEQNWVI+GRID LRKGVQDASGM DAVKKLRN
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRN

A0A1S3BTB0 uncharacterized protein LOC103493030

8.5e-86

91.8

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        MGKKHEIDTP++S Q DLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN
        YSKKTNIVEISNFLS  K EEIQHLKDMLKTAEEQN VI+GRIDVLRKGVQDASGM DAVKKLR+ CRSYG DGVNET DILN
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN

A0A5A7TAS4 Uncharacterized protein

8.5e-86

91.8

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        MGKKHEIDTP++S Q DLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN
        YSKKTNIVEISNFLS  K EEIQHLKDMLKTAEEQN VI+GRIDVLRKGVQDASGM DAVKKLR+ CRSYG DGVNET DILN
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

1.1e-77

85.96

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        M KKHEI TP+SSSQ DLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET
        YSKKTNI+EI+N+LS TKK EIQHLKDMLKTAEEQN  ++GRID+LRKGVQDAS M DAV+KLRN CR+Y  DGV+ T
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

2.1e-76

84.83

Show/hide

Query:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL
        M KKHEI TP+SSSQ DLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET+VGLVLDNVEQLL+EQDLDPL
Subjt:  MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPL

Query:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET
        YSKKTNI+EI+N+LS TKK EIQHLKDMLKTAEEQN  ++GRID+LRKGVQDAS M DAV+KLRN CR+Y  DGV+ T
Subjt:  YSKKTNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNET

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

7.9e-36

47.59

Show/hide

Query:  HEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPLYSKK
        HE D    S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQ+ L +L+ +V+ +LH  IE+EF+  C ETQVG +LD VE+L++EQ LDPL+S K
Subjt:  HEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPLYSKK

Query:  TNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSY
        T+++ I+  L+T+KK EIQ L  +L+ AEEQN   + RI +L+K  QD SG  D ++KL      Y
Subjt:  TNIVEISNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAAAAAGCACGAAATTGATACTCCTATGAGCTCCAGCCAGAAGGATCTGAAAAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTTACTTCCTGTTCTAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCAGAGCAAGATTATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTCTCCATGGAAACATAGAGGACGAGTTTGAGT
CATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGACGAGCAAGATCTAGACCCACTGTATTCAAAGAAGACCAATATAGTGGAAATT
TCTAATTTTCTGTCCACGACAAAGAAGGAGGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACTGGGTTATTAAAGGCCGTATCGATGTTTTAAG
GAAAGGAGTGCAAGATGCCTCTGGCATGGGAGATGCTGTTAAAAAGCTAAGAAACAACTGCAGATCTTACGGAGCTGATGGTGTTAATGAGACCTTCGATATACTTAACT
GA

mRNA sequence

Show/hide mRNA sequence

CAACTCTCAAGAAATCTCCCGCTAATTACTTCAGAATTTTCGGATTTCAATTTCTTTGTCGGTTTGGCTATTCGTCGCTACCGTCGCCTCCGCCGCCGCGACTCGACGGC
ACTAACCGAGAATTTAGCAAGATAGGGTTGGGGATCGTAGTGTACAAAGGTTTTGAAAATGGGGAAAAAGCACGAAATTGATACTCCTATGAGCTCCAGCCAGAAGGATC
TGAAAAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTTACTTCCTGTTCTAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTGCAGAGCAAGATTATCTTCAT
CGTCTTTTCATTCAGGTTATAACTTCTCTCCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACT
TTTGGACGAGCAAGATCTAGACCCACTGTATTCAAAGAAGACCAATATAGTGGAAATTTCTAATTTTCTGTCCACGACAAAGAAGGAGGAGATCCAACACTTGAAGGACA
TGCTAAAAACGGCTGAGGAACAGAACTGGGTTATTAAAGGCCGTATCGATGTTTTAAGGAAAGGAGTGCAAGATGCCTCTGGCATGGGAGATGCTGTTAAAAAGCTAAGA
AACAACTGCAGATCTTACGGAGCTGATGGTGTTAATGAGACCTTCGATATACTTAACTGATGCTGTTAAATAGCAAGGGACATTTTTGGTAGGCTTTATCATCCTCTTTG
CAATGAAGATTGTAACCACAATCCAGTGGCACCTATCAAGCACAAACACTCTATTTTAGGTAGTGCGCCTGGCAAGTAAGGTCCTATTTTTATTTACTATTTTTATTTAG
GATAATTGCAATGAGTAGCATTTTTAAATAATTAAGTGCATATGAACATTTTTAAAAAATTGTAAATTTACTAGGATTTATGAAAGATAAACTCTATCGTTGATAAACTT
TGAAAGTTGG

Protein sequence

Show/hide protein sequence

MGKKHEIDTPMSSSQKDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLDEQDLDPLYSKKTNIVEI
SNFLSTTKKEEIQHLKDMLKTAEEQNWVIKGRIDVLRKGVQDASGMGDAVKKLRNNCRSYGADGVNETFDILN

PI0005663 (gene) of Melon (PI 482460) v1 genome