CuGenDBv2

Gene ID	PI0005708
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	ATP-dependent helicase/deoxyribonuclease subunit B
Genome location	chr08:23227536..23235191
RNA-Seq Expression	PI0005708
Synteny	PI0005708
Gene Ontology terms	GO:0006979 - response to oxidative stress (biological process) GO:0009555 - pollen development (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137681.1 uncharacterized protein LOC101203220 [Cucumis sativus]

1.6e-117

96.79

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MAKPPIL LLLSLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILS+YILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_008442332.1 PREDICTED: uncharacterized protein LOC103486235 isoform X2 [Cucumis melo]

6.0e-117

96.79

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Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_022971506.1 uncharacterized protein LOC111470204 [Cucurbita maxima]

1.8e-113

92.66

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Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP L LL+SL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSKEKLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_023541018.1 uncharacterized protein LOC111801222 [Cucurbita pepo subsp. pepo]

1.8e-113

92.66

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Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP L LL+SL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSKEKLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_038903796.1 uncharacterized protein LOC120090293 isoform X1 [Benincasa hispida]

1.3e-114

94.5

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Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PPIL LL+SLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINR+S
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHISK+FWDQQHWPKHILVRYTWEEQSEIDV SGLYVLFGSGLTLSFILSI+ILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIP VGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9R0 Uncharacterized protein

7.7e-118

96.79

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        MAKPPIL LLLSLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILS+YILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A1S3B641 uncharacterized protein LOC103486235 isoform X2

2.9e-117

96.79

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A5A7TLX6 Uncharacterized protein

2.9e-117

96.79

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSK+KLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1EYS2 uncharacterized protein LOC111440559

1.5e-113

92.66

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP L LL+SL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSKEKLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1I3H9 uncharacterized protein LOC111470204

8.8e-114

92.66

Show/hide

Query:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PP L LL+SL SL+P  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV
        A VPMIDVHLRYSGSDLHGVTAKV+DMPHIY+D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL L+FILSIYILQSSKEKLARFV
Subjt:  AAVPMIDVHLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51610.1 unknown protein

1.4e-92

77.56

Show/hide

Query:  LLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAAVPMIDV
        L+L  LS   +S AYRPGDIV MSKMGQYHSSRT WHD+IG+HCPIF VNREVL+PI KP+GYTG DPYKI FQVG EKFL+ WLLVINRKS+ VPMIDV
Subjt:  LLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAAVPMIDV

Query:  HLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFVRETVVESS
        +LRYSG DL GVTA+V+DMPH Y++THP I KQFWD QHWPKH+LVRYTW+EQSEIDV+SG YVLFGS LT SF+LSIY+LQSS+EKLARFVRETVVESS
Subjt:  HLRYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFVRETVVESS

Query:  IPGVG
           VG
Subjt:  IPGVG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAAACCTCCAATTCTATTTCTCCTCCTCTCCTTATTGTCGCTCGTTCCGATTTCGCTGGCTTACAGGCCTGGAGACATCGTTCCGATGAGCAAGATGGGACAGTA
TCACTCGTCGAGAACAGTTTGGCACGATATGATAGGGCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTAGTTCCTATACCGAAACCGGTCGGCTACACAGGAG
CTGATCCCTATAAAATATCTTTTCAAGTTGGAAAAGAGAAGTTTCTAGTCCCATGGCTTCTTGTGATTAATCGCAAAAGTGCAGCAGTTCCAATGATTGATGTCCACTTG
AGGTACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGCCTCATATCTATATTGATACACACCCTCATATTAGCAAACAATTCTGGGATCAACAACA
TTGGCCGAAGCACATTCTTGTCCGTTATACATGGGAGGAGCAATCAGAGATTGATGTGACTTCTGGATTATATGTTTTGTTCGGATCAGGTCTTACGCTCTCTTTTATTC
TGTCAATTTACATCTTGCAATCATCGAAGGAGAAGTTAGCAAGGTTTGTAAGAGAAACAGTAGTTGAAAGCAGCATTCCTGGCGTAGGAGTGGCAAAAGTGGAATAG

mRNA sequence

Show/hide mRNA sequence

CTGGATTAGAAAGTAGCGGGCTCTGGGTAGCAAGGATCCCCGCCAGTCCAAAAAGGACAGGACGGAAACTGATTCTATTCCACAGACCTCCCGTTCTTCGAACGATTCAG
AAAATTACCTTCGACCATGGCAAAACCTCCAATTCTATTTCTCCTCCTCTCCTTATTGTCGCTCGTTCCGATTTCGCTGGCTTACAGGCCTGGAGACATCGTTCCGATGA
GCAAGATGGGACAGTATCACTCGTCGAGAACAGTTTGGCACGATATGATAGGGCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTAGTTCCTATACCGAAACCG
GTCGGCTACACAGGAGCTGATCCCTATAAAATATCTTTTCAAGTTGGAAAAGAGAAGTTTCTAGTCCCATGGCTTCTTGTGATTAATCGCAAAAGTGCAGCAGTTCCAAT
GATTGATGTCCACTTGAGGTACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGCCTCATATCTATATTGATACACACCCTCATATTAGCAAACAAT
TCTGGGATCAACAACATTGGCCGAAGCACATTCTTGTCCGTTATACATGGGAGGAGCAATCAGAGATTGATGTGACTTCTGGATTATATGTTTTGTTCGGATCAGGTCTT
ACGCTCTCTTTTATTCTGTCAATTTACATCTTGCAATCATCGAAGGAGAAGTTAGCAAGGTTTGTAAGAGAAACAGTAGTTGAAAGCAGCATTCCTGGCGTAGGAGTGGC
AAAAGTGGAATAGGTGTAGTGGAGGGAGTTCACGGAAACACTTGCATAATATTAAGCTGGGCGTTGGGCGTTGGGCGTTGGGCATTACCGATTCAAATTGAAGCTGATAT
GCTATTATGTCCTTCCAGAGGGTTAAAAAGCGGTATGCAAGTTGCACATTTCTTTTAGAGACAAAACTTAACTCTTTATCTGTAAGGTGTATGTAGTTTGAAGGACATCG
CCCTACGTCTACCTCAAAAAAGTCTAATATTACGGACCCCCATATGTTTTCATTTTCTAGGTCGGGGACGAATCTTTTTTCTTTTTTCTAATTTTTTAATTTTCTTTTCT
TTTCTTTTCTGTAAATGCGACTAAGACTAGTTGGGTAATTCTACTTTGGGTAATTTCTTTACACCCTTGTACTTTCTGTCCCTATTGTATTTCTCCCTTACTGACTCGCA
TCTCTTTTTGAAAGGTTCAGATTTTATTTTAATCTCTGAATTTTATACTTTATTTTA

Protein sequence

Show/hide protein sequence

MAKPPILFLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAAVPMIDVHL
RYSGSDLHGVTAKVVDMPHIYIDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLSFILSIYILQSSKEKLARFVRETVVESSIPGVGVAKVE

PI0005708 (gene) of Melon (PI 482460) v1 genome