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PI0005739 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005739
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase, catalytic core
Genome locationchr07:17648448..17648717
RNA-Seq ExpressionPI0005739
SyntenyPI0005739
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025923.1 Integrase, catalytic core [Cucumis melo var. makuwa]6.4e-1558.43Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV CSN+NQVEL++VFYVP MKK L+SVSQLTSA NFVVFGP+DVK                 + SIYVM V   Y+ KT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.8e-1661.8Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN+NQVEL+NVFYV EMKK LVSVSQLTSA+NF+VFG N+VKV                MDSIYVM   TTY+NK  K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.8e-1660.67Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN NQVEL+NVFYVP MKK LV++SQLTS  NFVVFGPNDVKV                MD IYVM   T Y+NKT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]4.5e-1661.8Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN+NQVEL+NVFYV  MKK LVSVSQLTSA NFVVFGP+DVKV                MDSIYVM   T Y+NKT K +T DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

TYK27792.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.2e-1559.55Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV CSN+NQVEL++VFYVP MKK L+SVSQLTSA NFVVFGP+DVKV                + SIYVM V   Y+ KT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

TrEMBL top hitse value%identityAlignment
A0A5A7SML7 Integrase, catalytic core3.1e-1558.43Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV CSN+NQVEL++VFYVP MKK L+SVSQLTSA NFVVFGP+DVK                 + SIYVM V   Y+ KT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

A0A5A7ST06 Integrase, catalytic core2.8e-1661.8Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN+NQVEL+NVFYV EMKK LVSVSQLTSA+NF+VFG N+VKV                MDSIYVM   TTY+NK  K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

A0A5A7T2J1 Integrase, catalytic core2.8e-1660.67Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN NQVEL+NVFYVP MKK LV++SQLTS  NFVVFGPNDVKV                MD IYVM   T Y+NKT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

A0A5A7TYD2 Integrase, catalytic core2.2e-1661.8Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV  SN+NQVEL+NVFYV  MKK LVSVSQLTSA NFVVFGP+DVKV                MDSIYVM   T Y+NKT K +T DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

A0A5D3DWA1 Integrase, catalytic core1.1e-1559.55Show/hide
Query:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL
        MIV CSN+NQVEL++VFYVP MKK L+SVSQLTSA NFVVFGP+DVKV                + SIYVM V   Y+ KT K ET DL
Subjt:  MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKV----------------MDSIYVMLVGTTYMNKTGKTETTDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTGTCTTGTTCCAATACCAATCAAGTGGAACTAAATAATGTATTTTATGTGCCTGAAATGAAGAAGACTTTGGTGTCAGTATCTCAATTGACTTCAGCAGCCAA
CTTCGTCGTGTTTGGACCTAATGATGTCAAGGTGATGGACTCTATTTACGTTATGTTGGTAGGGACCACCTACATGAACAAAACAGGAAAGACTGAAACAACAGATTTGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGATAGTGTCTTGTTCCAATACCAATCAAGTGGAACTAAATAATGTATTTTATGTGCCTGAAATGAAGAAGACTTTGGTGTCAGTATCTCAATTGACTTCAGCAGCCAA
CTTCGTCGTGTTTGGACCTAATGATGTCAAGGTGATGGACTCTATTTACGTTATGTTGGTAGGGACCACCTACATGAACAAAACAGGAAAGACTGAAACAACAGATTTGT
GA
Protein sequenceShow/hide protein sequence
MIVSCSNTNQVELNNVFYVPEMKKTLVSVSQLTSAANFVVFGPNDVKVMDSIYVMLVGTTYMNKTGKTETTDL