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PI0005745 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005745
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:15140806..15141425
RNA-Seq ExpressionPI0005745
SyntenyPI0005745
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-7880.45Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DCRVKSLKK   +   MRGPSCSGFGWNE++QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFDNWVKSHP  +GLLHKSFPYYDDLSYVFD+D AT A  ETFADVGSNV N FND VPL D +D+DIP MYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-6767.04Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL RMMA+KLP   ++ +  IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +C
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        I+AE++LFDNWV+SHP  KGLL+KSFPYYD+L+YVF RD ATG  AETFADVGSN P    D   + D  +ED P +YS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

TYJ96194.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-6767.04Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL RMMAEKLP   ++ +  IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +C
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        I+AE++LFDNWV+SHP  KGLL+K FPYYD+L+YVF RD ATG  AETFADVGSN P    D   + D  +ED P +YS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

TYK19779.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-7879.89Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DCRVKSLKK   +   +RGPSCSGFGWNE++QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFDNWVKSHP  +GLLHKSFPYYDDLSYVFD+D AT A  ETFADVGSNV N FND VPL D +D+DIP MYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]3.8e-8584.36Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFD+W+KSHP  KGLLHKSFPYYDDLSYVF +D ATGA +ETF +VGSNV N FND++PL D HDEDIPTMYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.8e-8584.36Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFD+W+KSHP  KGLLHKSFPYYDDLSYVF +D ATGA +ETF +VGSNV N FND++PL D HDEDIPTMYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

A0A5A7TJS2 Retrotransposon protein9.8e-7980.45Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DCRVKSLKK   +   MRGPSCSGFGWNE++QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFDNWVKSHP  +GLLHKSFPYYDDLSYVFD+D AT A  ETFADVGSNV N FND VPL D +D+DIP MYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

A0A5A7U0H7 Retrotransposon protein1.8e-8584.36Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFD+W+KSHP  KGLLHKSFPYYDDLSYVF +D ATGA +ETF +VGSNV N FND++PL D HDEDIPTMYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

A0A5A7V6Q9 Retrotransposon protein6.0e-6867.04Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL RMMA+KLP   ++ +  IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +C
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        I+AE++LFDNWV+SHP  KGLL+KSFPYYD+L+YVF RD ATG  AETFADVGSN P    D   + D  +ED P +YS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

A0A5D3D8J6 Retrotransposon protein3.7e-7879.89Show/hide
Query:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC
        MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DCRVKSLKK   +   +RGPSCSGFGWNE++QC
Subjt:  MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQC

Query:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS
        IIAERDLFDNWVKSHP  +GLLHKSFPYYDDLSYVFD+D AT A  ETFADVGSNV N FND VPL D +D+DIP MYS
Subjt:  IIAERDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein3.4e-0722.73Show/hide
Query:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW
        WT   +  L++ LVE V++G       TF      ++      K    +      +  R K L++ Y  I  +     +GF W+     +IA+ D+++ +
Subjt:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW

Query:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATG
        +++HP  +    K+ P Y +L ++F ++ + G
Subjt:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATG

AT4G02210.1 unknown protein6.9e-0822.86Show/hide
Query:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW
        WT E +   +E +VE V  G  R ++  F       +      K     + G   +  R K+L+  ++++  +      GF W++  Q ++A+  ++D +
Subjt:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW

Query:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD
        +K HP  +    KS P Y DL  V+    +     E+ ++
Subjt:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD

AT4G02210.2 unknown protein6.9e-0822.86Show/hide
Query:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW
        WT E +   +E +VE V  G  R ++  F       +      K     + G   +  R K+L+  ++++  +      GF W++  Q ++A+  ++D +
Subjt:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDNW

Query:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD
        +K HP  +    KS P Y DL  V+    +     E+ ++
Subjt:  VKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD

AT5G27260.1 unknown protein1.3e-1127.22Show/hide
Query:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEK--LPDTNIQGSPTID-----CRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAE
        W+ EE   LV+ LVE +++  WR  NGT        + ++  E   +P+ N +   + +      R+K LK  YQ+  +++  S SGFGW+   +   A 
Subjt:  WTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEK--LPDTNIQGSPTID-----CRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAE

Query:  RDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD--------VGSNVPNSFNDSVPLDDLHDEDIPT
         +++ +++K+HP  K L + +F ++D+L  +F    ATG  A    D         G N    + D    D++++ D  T
Subjt:  RDLFDNWVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFAD--------VGSNVPNSFNDSVPLDDLHDEDIPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTAGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAA
TGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCAGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTCGTGTGAAATCCC
TCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGCAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAAT
TGGGTCAAGAGTCATCCTGGGGAGAAAGGACTGTTACACAAATCATTTCCATATTATGACGATTTGTCATACGTGTTCGACAGAGATTGGGCAACAGGAGCATGTGCGGA
GACGTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCACTTGATGATCTACATGACGAAGACATCCCGACGATGTATAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTAGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAA
TGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCAGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTCGTGTGAAATCCC
TCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGCAGTGGGTTCGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACGCGACTTGTTTGATAAT
TGGGTCAAGAGTCATCCTGGGGAGAAAGGACTGTTACACAAATCATTTCCATATTATGACGATTTGTCATACGTGTTCGACAGAGATTGGGCAACAGGAGCATGTGCGGA
GACGTTTGCTGACGTGGGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCACTTGATGATCTACATGACGAAGACATCCCGACGATGTATAGCTAA
Protein sequenceShow/hide protein sequence
MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERDLFDN
WVKSHPGEKGLLHKSFPYYDDLSYVFDRDWATGACAETFADVGSNVPNSFNDSVPLDDLHDEDIPTMYS