; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0005757 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005757
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionYrdC-like domain-containing protein
Genome locationchr12:22826675..22831057
RNA-Seq ExpressionPI0005757
SyntenyPI0005757
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64727.2 hypothetical protein Csa_013125 [Cucumis sativus]1.4e-14295.62Show/hide
Query:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
        MADSLSLIRTF TF SS LGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCMRV+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE
Subjt:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAE

Query:  AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
        AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL
Subjt:  AVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANL

Query:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSA+EQTIATLERYSLLEAAATI
Subjt:  SGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

TYK21224.1 yrdC domain-containing protein [Cucumis melo var. makuwa]1.3e-13582.8Show/hide
Query:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATF SSHLGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCM V+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSA++QTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIA

Query:  TLERYSLLEAAATI
        TL+RYSLLEAAATI
Subjt:  TLERYSLLEAAATI

XP_004148791.1 yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]4.7e-14695.37Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKMADSLSLIRTF TF SS LGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCMRV+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSA+EQTIATLERYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

XP_008465284.1 PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]5.1e-14594.66Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKMADSLSLIRTFATF SSHLGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCM V+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSA++QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]4.4e-14492.53Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKM +SLSLIRTF TF SSHLGSPN G+VSFLQQNRGSRVSF KTTWSLEKCCMRV+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSAKEQT+A LERYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein2.3e-14695.37Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKMADSLSLIRTF TF SS LGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCMRV+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTE+GTFKIIRAGSA+EQTIATLERYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial2.5e-14594.66Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKMADSLSLIRTFATF SSHLGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCM V+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSA++QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

A0A5A7T5W1 YrdC domain-containing protein2.5e-14594.66Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN LPAKMADSLSLIRTFATF SSHLGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCM V+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACSAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSA++QTIATL+RYSLLEAAATI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI

A0A5D3DCB7 YrdC domain-containing protein6.2e-13682.8Show/hide
Query:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---
        MADSLSLIRTFATF SSHLGS N GIVSFLQ+NRGSRVSFLKT WSLEKCCM V+NCL+ALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC   
Subjt:  MADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDAC---

Query:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV
                                             SAEAVHRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGESSV
Subjt:  -------------------------------------SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSV

Query:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIA
        LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSA++QTIA
Subjt:  LDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIA

Query:  TLERYSLLEAAATI
        TL+RYSLLEAAATI
Subjt:  TLERYSLLEAAATI

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial2.9e-13387.41Show/hide
Query:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN  PAKM + LSLIRTFATF SS LG+PN G VSFL  NRGSR++F KT WSLEKC MRV+N L+ALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLA
Subjt:  MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAA
        ALTSANLSG+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLT+RG FKIIRAGSAKEQT+ATLERYSLLE A
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAA

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial7.4e-4649.01Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  +EA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F IIR G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial2.2e-4247.29Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A S+ A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATL-ERY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATL-ERY

Query:  SLL
         LL
Subjt:  SLL

Q499R4 YrdC domain-containing protein, mitochondrial1.7e-4247.29Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLE-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLE-RY

Query:  SLL
         LL
Subjt:  SLL

Q60369 Putative threonylcarbamoyl-AMP synthase3.7e-2135.33Show/hide
Query:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV
        GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPGP+T++LK+  G   ++ K      D IG+R+
Subjt:  GKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GESSVLDKSLNPGLDSIGVRV

Query:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE
        PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STI+ + +
Subjt:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTE

Q86U90 YrdC domain-containing protein, mitochondrial2.0e-4347.6Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  + A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L+K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATL-ERY
        +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST+VDL+  G F IIR G A E T A L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATL-ERY

Query:  SLLEAAAT
         LL + A+
Subjt:  SLLEAAAT

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain4.7e-1128.52Show/hide
Query:  ATFSSSHLGSPNRGIVSFLQQNRGSRVSFL--KTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIK
        +T  S+   SP R IV+   +    R+ +   + T   E   + VD C            Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK
Subjt:  ATFSSSHLGSPNRGIVSFLQQNRGSRVSFL--KTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIK

Query:  GRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKR-----------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRR
          + + PL+I    + DI  F  T   P G           +   LPGP T +L             G +SV   S      ++GVR+ D    + I ++
Subjt:  GRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKR-----------GESSVLDKSLNPGLDSIGVRVPDADFIRLISRR

Query:  SETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTERGTF-KIIRAG
         +  L  TS  + G   +  + D   +      +   +V DGG+  A    STIVD+T  G + K+IR G
Subjt:  SETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIVDLTERGTF-KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain8.2e-4071.55Show/hide
Query:  KTTWSLEKC--CMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG
        K  WSLE+   C+   +CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV RIYEIKGRKLTSPLAICVGDV DI R A T HLP G
Subjt:  KTTWSLEKC--CMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG

Query:  LLDSLLPGPVTVVLKR
        LLDSLLPGPVT+VL+R
Subjt:  LLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain7.8e-9172.61Show/hide
Query:  KTTWSLEKC--CMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG
        K  WSLE+   C+   +CL  + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV RIYEIKGRKLTSPLAICVGDV DI R A T HLP G
Subjt:  KTTWSLEKC--CMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSG

Query:  LLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVD
        LLDSLLPGPVT+VL+RGESS+L+KSLNPG+ +IGVRVPD +FIR +SR S + LALTSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTIVD
Subjt:  LLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVD

Query:  LTERGTFKIIRAGSAKEQTIATLERYSLLE
        LT+ G +KIIR GSAK+ T+A LE+Y L E
Subjt:  LTERGTFKIIRAGSAKEQTIATLERYSLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCCACTTTTTCCTCTTCTCACTTAGGTTCTCCCAATCGTGGGATAGTTTCGTTCTT
GCAACAAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGACTTGGAGTTTGGAAAAATGTTGTATGCGTGTAGACAATTGTTTGCGAGCACTTCGTCCTGCCTCTGAAG
CTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTGCTGAAGCAGTCCAT
AGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGGGATGTCTCTGACATAACTCGCTTTGCAGTAACAGACCATTTACCTTCTGGTTT
GCTTGACTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTAC
CTGATGCTGACTTTATTCGACTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAA
AATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGTTGACCTTACTGAGCGAGGCACATTTAAGATTATAAG
AGCTGGAAGTGCAAAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACCATTTGA
mRNA sequenceShow/hide mRNA sequence
GTCGTACTTCTTCTCAATCTCTACGGCAGCTCGGCGCCGGCGGTCATCTCTCAATTGGTCAAACCCAATGTTTTGATTTCGAATCCTTCACAGTCCCAATCCCAATCCCA
AGCTTCCCAACACCTTGTTCTCTCTCTTCAAACACCATGAACGCACTTCCGGCGAAAATGGCTGACAGTCTCTCTCTAATCAGAACGTTTGCCACTTTTTCCTCTTCTCA
CTTAGGTTCTCCCAATCGTGGGATAGTTTCGTTCTTGCAACAAAATAGAGGATCAAGGGTTAGTTTTCTTAAAACGACTTGGAGTTTGGAAAAATGTTGTATGCGTGTAG
ACAATTGTTTGCGAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCCACTGATACTCTCTATGGA
CTCGCTTGTGATGCTTGTTCTGCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGGGATGTCTCTGACATAAC
TCGCTTTGCAGTAACAGACCATTTACCTTCTGGTTTGCTTGACTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTGAAAAGAGGTGAATCGAGTGTTCTTGACAAGTCTT
TGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGACTGATTTCTCGTAGATCAGAGACAGCATTAGCTCTTACAAGTGCTAATTTAAGT
GGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAATCTATGGCAACACTGTGCTTATGTATACGATGGGGGTGTTCTTCCTGCTGGACGAGCAGGCTCGACGATCGT
TGACCTTACTGAGCGAGGCACATTTAAGATTATAAGAGCTGGAAGTGCAAAGGAGCAGACTATTGCAACACTTGAAAGGTATTCACTATTAGAAGCAGCAGCTACCATTT
GAACATCTGAATCTAGTCATGTTCCTAAGCATCTGTTCATTATCATAGAGGTTCCAAAGATTCTTTTCTTAGGCTGAGTTAAAAGGGCTCGTTTCAATTGACTAGAAGAA
AAAAATGTTTTCAAAAAAGGTCTTTATTTTTTTTAACTCTTTTGATAAAAAGGAGTTTAAAATAGATTTTAAAAGTGTTTCACAAGTTATTTTTAATGGTTGTCAAACAT
ACCAATTTTTTTAAAAAATGACTTATTTTCAAAATACCAAAGATCAAGTGTTATGGCTTTACCATTTCCTTTTTAACCACTATTTTTCCCTCTTTTACTGAAGTTCTTGA
TTTTATTTGTATGATTATGTAACATTTGGATATGTATTATGATGAGGAATTCACTAATACTTGGAATGAGAAGAACTTTCAAATTTGCCTACGACTTGTAGTGCAGTGAA
GAAAAATACATTCAAAATGTGGTGGGATGGATAGGGTATTAAAATTGTTGCA
Protein sequenceShow/hide protein sequence
MNALPAKMADSLSLIRTFATFSSSHLGSPNRGIVSFLQQNRGSRVSFLKTTWSLEKCCMRVDNCLRALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVH
RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE
NLWQHCAYVYDGGVLPAGRAGSTIVDLTERGTFKIIRAGSAKEQTIATLERYSLLEAAATI