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PI0005769 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005769
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:9600651..9600917
RNA-Seq ExpressionPI0005769
SyntenyPI0005769
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025948.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-2775.29Show/hide
Query:  TSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQG
        TSSSRAPKHIWT +EEAKLV C V+LVSS GWRSDNGTFR  YLAQ+Q+MMA+K+  CNIQGV  I  QIKALKR YQAIVE++G
Subjt:  TSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQG

KAA0066605.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-3177.01Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M SSSRAPKH WTKEEEAKLV C VELVS+GGWRS+NGTFRP YLAQLQ+MMA+K+P  NIQG  TIDY++K+LK+TYQAI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.4e-2771.26Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M S SRAPKH WTKEEE K V C VELVSSGGWRSDNGTF+P YLAQLQ+MMA+K+P  NIQ   TID  +K+LK+TY AI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

XP_031739738.1 uncharacterized protein LOC116403265 [Cucumis sativus]8.0e-2870.11Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        MTSSSRAPKH+WTKEEEA LV C VELVS+GGW+S+NGTFRP YLAQL ++MA K+P CN+     ID +IK LKR YQAI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]1.6e-2870.11Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        MTSSSRAPKH+WTKEEEA LV C V+LVS+G W+SDNGTFRP YLAQL +MM  K+P CN+     IDY+IK LKR+YQAI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859536.6e-2871.26Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M S SRAPKH WTKEEE K V C VELVSSGGWRSDNGTF+P YLAQLQ+MMA+K+P  NIQ   TID  +K+LK+TY AI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

A0A5A7SIE9 Retrotransposon protein1.1e-2775.29Show/hide
Query:  TSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQG
        TSSSRAPKHIWT +EEAKLV C V+LVSS GWRSDNGTFR  YLAQ+Q+MMA+K+  CNIQGV  I  QIKALKR YQAIVE++G
Subjt:  TSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQG

A0A5A7U0H7 Retrotransposon protein6.6e-2871.26Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M S SRAPKH WTKEEE K V C VELVSSGGWRSDNGTF+P YLAQLQ+MMA+K+P  NIQ   TID  +K+LK+TY AI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

A0A5A7V6Q9 Retrotransposon protein5.6e-2764.37Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M++S+RAP+H+WT+EEE  LV C +ELVS GGW+SDNGTFRP YLAQL +MMAKK+P C ++    ID +IK LKRT+QAI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

A0A5D3CQS4 Retrotransposon protein9.9e-3277.01Show/hide
Query:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP
        M SSSRAPKH WTKEEEAKLV C VELVS+GGWRS+NGTFRP YLAQLQ+MMA+K+P  NIQG  TIDY++K+LK+TYQAI EM+GP
Subjt:  MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTTCTTCACGAGCACCTAAGCACATTTGGACGAAAGAGGAAGAAGCCAAACTCGTCGGGTGCTTTGTGGAGTTGGTCTCCTCCGGTGGGTGGAGATCCGATAA
CGGTACCTTCAGACCTAGGTACCTTGCACAACTACAACAGATGATGGCAAAGAAGGTGCCAAGCTGTAACATCCAGGGGGTCTTGACAATAGACTATCAGATCAAAGCCC
TTAAGAGAACCTACCAGGCGATCGTAGAAATGCAAGGGCCACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTTCTTCACGAGCACCTAAGCACATTTGGACGAAAGAGGAAGAAGCCAAACTCGTCGGGTGCTTTGTGGAGTTGGTCTCCTCCGGTGGGTGGAGATCCGATAA
CGGTACCTTCAGACCTAGGTACCTTGCACAACTACAACAGATGATGGCAAAGAAGGTGCCAAGCTGTAACATCCAGGGGGTCTTGACAATAGACTATCAGATCAAAGCCC
TTAAGAGAACCTACCAGGCGATCGTAGAAATGCAAGGGCCACCATGA
Protein sequenceShow/hide protein sequence
MTSSSRAPKHIWTKEEEAKLVGCFVELVSSGGWRSDNGTFRPRYLAQLQQMMAKKVPSCNIQGVLTIDYQIKALKRTYQAIVEMQGPP