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PI0005825 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005825
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:9434983..9435147
RNA-Seq ExpressionPI0005825
SyntenyPI0005825
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.8e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]4.8e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.8e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein3.9e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
A0A5A7UIM7 Putative nuclease HARBI11.4e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
A0A5A7VJX3 Retrotransposon protein2.3e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
A0A5D3BL48 Putative nuclease HARBI12.3e-1575.93Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
A0A5D3D9Z3 Retrotransposon protein3.9e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LAE+MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACGCTGACATACCAGACGAAGTTGATGAGGGTGACTCAACGTATGCCACTACTGGTGGGGAGGACATACATTATATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAGAAAAAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACGCTGACATACCAGACGAAGTTGATGAGGGTGACTCAACGTATGCCACTACTGGTGGGGAGGACATACATTATATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAGAAAAAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAEKMFCDWELRNQ